Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb4Q91XZ6 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb4Q91XZ6 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb4Q91XZ6 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb4Q91XZ6 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Pcdhb4Q91XZ6 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb4Q91XZ6 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb4Q91XZ6 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb4Q91XZ6 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC15.96■□□□□ 0.15
Pcdhb4Q91XZ6 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Pcdhb4Q91XZ6 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Pcdhb4Q91XZ6 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC15.96■□□□□ 0.15
Pcdhb4Q91XZ6 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb4Q91XZ6 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
Pcdhb4Q91XZ6 AC153881.2-201ENSMUST00000214877 204 ntBASIC15.96■□□□□ 0.15
Pcdhb4Q91XZ6 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb4Q91XZ6 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb4Q91XZ6 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb4Q91XZ6 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Pcdhb4Q91XZ6 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb4Q91XZ6 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb4Q91XZ6 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb4Q91XZ6 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb4Q91XZ6 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb4Q91XZ6 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb4Q91XZ6 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb4Q91XZ6 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb4Q91XZ6 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
Pcdhb4Q91XZ6 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.14
Pcdhb4Q91XZ6 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Pcdhb4Q91XZ6 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Pcdhb4Q91XZ6 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
Pcdhb4Q91XZ6 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
Pcdhb4Q91XZ6 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb4Q91XZ6 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb4Q91XZ6 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb4Q91XZ6 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb4Q91XZ6 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Pcdhb4Q91XZ6 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb4Q91XZ6 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb4Q91XZ6 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC15.95■□□□□ 0.14
Pcdhb4Q91XZ6 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Pcdhb4Q91XZ6 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb4Q91XZ6 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC15.95■□□□□ 0.14
Pcdhb4Q91XZ6 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb4Q91XZ6 Gm6433-201ENSMUST00000118634 875 ntBASIC15.95■□□□□ 0.14
Pcdhb4Q91XZ6 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Pcdhb4Q91XZ6 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC15.95■□□□□ 0.14
Pcdhb4Q91XZ6 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb4Q91XZ6 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb4Q91XZ6 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC15.95■□□□□ 0.14
Pcdhb4Q91XZ6 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Pcdhb4Q91XZ6 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb4Q91XZ6 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb4Q91XZ6 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb4Q91XZ6 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb4Q91XZ6 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb4Q91XZ6 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb4Q91XZ6 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb4Q91XZ6 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb4Q91XZ6 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb4Q91XZ6 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb4Q91XZ6 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb4Q91XZ6 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Pcdhb4Q91XZ6 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb4Q91XZ6 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb4Q91XZ6 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb4Q91XZ6 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb4Q91XZ6 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
Pcdhb4Q91XZ6 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb4Q91XZ6 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb4Q91XZ6 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb4Q91XZ6 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb4Q91XZ6 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC15.94■□□□□ 0.14
Pcdhb4Q91XZ6 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb4Q91XZ6 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb4Q91XZ6 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb4Q91XZ6 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb4Q91XZ6 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb4Q91XZ6 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb4Q91XZ6 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC15.94■□□□□ 0.14
Pcdhb4Q91XZ6 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb4Q91XZ6 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb4Q91XZ6 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb4Q91XZ6 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb4Q91XZ6 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb4Q91XZ6 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb4Q91XZ6 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC15.94■□□□□ 0.14
Pcdhb4Q91XZ6 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb4Q91XZ6 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb4Q91XZ6 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb4Q91XZ6 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb4Q91XZ6 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC15.93■□□□□ 0.14
Pcdhb4Q91XZ6 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb4Q91XZ6 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb4Q91XZ6 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Pcdhb4Q91XZ6 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb4Q91XZ6 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb4Q91XZ6 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
Pcdhb4Q91XZ6 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC15.93■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms