Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhb8Q91XZ2 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhb8Q91XZ2 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhb8Q91XZ2 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Pcdhb8Q91XZ2 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb8Q91XZ2 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb8Q91XZ2 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb8Q91XZ2 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb8Q91XZ2 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Pcdhb8Q91XZ2 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC15.7■□□□□ 0.1
Pcdhb8Q91XZ2 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb8Q91XZ2 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb8Q91XZ2 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Pcdhb8Q91XZ2 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb8Q91XZ2 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb8Q91XZ2 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb8Q91XZ2 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb8Q91XZ2 Mir770-201ENSMUST00000103252 94 ntBASIC15.7■□□□□ 0.1
Pcdhb8Q91XZ2 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC15.7■□□□□ 0.1
Pcdhb8Q91XZ2 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb8Q91XZ2 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb8Q91XZ2 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb8Q91XZ2 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb8Q91XZ2 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb8Q91XZ2 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb8Q91XZ2 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb8Q91XZ2 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC15.7■□□□□ 0.1
Pcdhb8Q91XZ2 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb8Q91XZ2 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb8Q91XZ2 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb8Q91XZ2 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb8Q91XZ2 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb8Q91XZ2 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC15.7■□□□□ 0.1
Pcdhb8Q91XZ2 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
Pcdhb8Q91XZ2 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC15.69■□□□□ 0.1
Pcdhb8Q91XZ2 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb8Q91XZ2 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb8Q91XZ2 Zkscan4-202ENSMUST00000225845 1506 ntBASIC15.69■□□□□ 0.1
Pcdhb8Q91XZ2 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb8Q91XZ2 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb8Q91XZ2 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC15.69■□□□□ 0.1
Pcdhb8Q91XZ2 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC15.69■□□□□ 0.1
Pcdhb8Q91XZ2 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
Pcdhb8Q91XZ2 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb8Q91XZ2 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb8Q91XZ2 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb8Q91XZ2 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb8Q91XZ2 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb8Q91XZ2 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb8Q91XZ2 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb8Q91XZ2 Gm9013-201ENSMUST00000132939 882 ntBASIC15.69■□□□□ 0.1
Pcdhb8Q91XZ2 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC15.69■□□□□ 0.1
Pcdhb8Q91XZ2 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb8Q91XZ2 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Pcdhb8Q91XZ2 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb8Q91XZ2 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb8Q91XZ2 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb8Q91XZ2 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb8Q91XZ2 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb8Q91XZ2 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC15.69■□□□□ 0.1
Pcdhb8Q91XZ2 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb8Q91XZ2 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
Pcdhb8Q91XZ2 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC15.69■□□□□ 0.1
Pcdhb8Q91XZ2 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb8Q91XZ2 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb8Q91XZ2 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb8Q91XZ2 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC15.68■□□□□ 0.1
Pcdhb8Q91XZ2 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb8Q91XZ2 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb8Q91XZ2 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb8Q91XZ2 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC15.68■□□□□ 0.1
Pcdhb8Q91XZ2 Gm10052-201ENSMUST00000168019 960 ntBASIC15.68■□□□□ 0.1
Pcdhb8Q91XZ2 AC121577.1-201ENSMUST00000227302 707 ntBASIC15.68■□□□□ 0.1
Pcdhb8Q91XZ2 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb8Q91XZ2 Gm7729-201ENSMUST00000050143 801 ntBASIC15.68■□□□□ 0.1
Pcdhb8Q91XZ2 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb8Q91XZ2 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb8Q91XZ2 Gm19430-201ENSMUST00000193847 2137 ntBASIC15.68■□□□□ 0.1
Pcdhb8Q91XZ2 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb8Q91XZ2 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Pcdhb8Q91XZ2 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Pcdhb8Q91XZ2 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb8Q91XZ2 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb8Q91XZ2 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb8Q91XZ2 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb8Q91XZ2 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb8Q91XZ2 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Pcdhb8Q91XZ2 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC15.67■□□□□ 0.1
Pcdhb8Q91XZ2 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb8Q91XZ2 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb8Q91XZ2 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Pcdhb8Q91XZ2 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb8Q91XZ2 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb8Q91XZ2 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb8Q91XZ2 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb8Q91XZ2 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb8Q91XZ2 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb8Q91XZ2 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb8Q91XZ2 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb8Q91XZ2 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms