Protein–RNA interactions for Protein: Q91XX9

Pcdhga9, Protocadherin gamma A9, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga9Q91XX9 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhga9Q91XX9 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhga9Q91XX9 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Pcdhga9Q91XX9 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhga9Q91XX9 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhga9Q91XX9 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhga9Q91XX9 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC15.86■□□□□ 0.13
Pcdhga9Q91XX9 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhga9Q91XX9 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhga9Q91XX9 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhga9Q91XX9 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
Pcdhga9Q91XX9 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC15.86■□□□□ 0.13
Pcdhga9Q91XX9 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhga9Q91XX9 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhga9Q91XX9 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhga9Q91XX9 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhga9Q91XX9 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhga9Q91XX9 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC15.86■□□□□ 0.13
Pcdhga9Q91XX9 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC15.86■□□□□ 0.13
Pcdhga9Q91XX9 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC15.86■□□□□ 0.13
Pcdhga9Q91XX9 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC15.86■□□□□ 0.13
Pcdhga9Q91XX9 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC15.86■□□□□ 0.13
Pcdhga9Q91XX9 Gm34391-201ENSMUST00000203706 907 ntBASIC15.86■□□□□ 0.13
Pcdhga9Q91XX9 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhga9Q91XX9 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhga9Q91XX9 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhga9Q91XX9 Gm20628-201ENSMUST00000177363 3215 ntBASIC15.86■□□□□ 0.13
Pcdhga9Q91XX9 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhga9Q91XX9 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhga9Q91XX9 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC15.86■□□□□ 0.13
Pcdhga9Q91XX9 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhga9Q91XX9 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhga9Q91XX9 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC15.85■□□□□ 0.13
Pcdhga9Q91XX9 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhga9Q91XX9 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhga9Q91XX9 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhga9Q91XX9 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC15.85■□□□□ 0.13
Pcdhga9Q91XX9 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhga9Q91XX9 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhga9Q91XX9 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhga9Q91XX9 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
Pcdhga9Q91XX9 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC15.85■□□□□ 0.13
Pcdhga9Q91XX9 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhga9Q91XX9 Birc2-201ENSMUST00000054878 378 ntBASIC15.85■□□□□ 0.13
Pcdhga9Q91XX9 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Pcdhga9Q91XX9 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Pcdhga9Q91XX9 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhga9Q91XX9 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhga9Q91XX9 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC15.85■□□□□ 0.13
Pcdhga9Q91XX9 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC15.85■□□□□ 0.13
Pcdhga9Q91XX9 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhga9Q91XX9 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhga9Q91XX9 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhga9Q91XX9 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhga9Q91XX9 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhga9Q91XX9 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Pcdhga9Q91XX9 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC15.84■□□□□ 0.13
Pcdhga9Q91XX9 Gm13312-201ENSMUST00000119631 718 ntBASIC15.84■□□□□ 0.13
Pcdhga9Q91XX9 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC15.84■□□□□ 0.13
Pcdhga9Q91XX9 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhga9Q91XX9 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Pcdhga9Q91XX9 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC15.84■□□□□ 0.13
Pcdhga9Q91XX9 AC124569.2-201ENSMUST00000225998 818 ntBASIC15.84■□□□□ 0.13
Pcdhga9Q91XX9 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhga9Q91XX9 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhga9Q91XX9 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhga9Q91XX9 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Pcdhga9Q91XX9 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhga9Q91XX9 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhga9Q91XX9 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhga9Q91XX9 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhga9Q91XX9 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhga9Q91XX9 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhga9Q91XX9 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhga9Q91XX9 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Pcdhga9Q91XX9 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Pcdhga9Q91XX9 Hivep3-201ENSMUST00000084306 2973 ntBASIC15.83■□□□□ 0.12
Pcdhga9Q91XX9 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhga9Q91XX9 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC15.83■□□□□ 0.12
Pcdhga9Q91XX9 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Pcdhga9Q91XX9 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC15.83■□□□□ 0.12
Pcdhga9Q91XX9 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhga9Q91XX9 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC15.83■□□□□ 0.12
Pcdhga9Q91XX9 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Pcdhga9Q91XX9 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC15.83■□□□□ 0.12
Pcdhga9Q91XX9 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhga9Q91XX9 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhga9Q91XX9 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhga9Q91XX9 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC15.83■□□□□ 0.12
Pcdhga9Q91XX9 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
Pcdhga9Q91XX9 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Pcdhga9Q91XX9 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhga9Q91XX9 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
Pcdhga9Q91XX9 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC15.82■□□□□ 0.12
Pcdhga9Q91XX9 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhga9Q91XX9 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhga9Q91XX9 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhga9Q91XX9 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhga9Q91XX9 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhga9Q91XX9 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms