Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vsx1Q91V10 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vsx1Q91V10 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC15.85■□□□□ 0.13
Vsx1Q91V10 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Vsx1Q91V10 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vsx1Q91V10 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
Vsx1Q91V10 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vsx1Q91V10 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vsx1Q91V10 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vsx1Q91V10 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Vsx1Q91V10 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Vsx1Q91V10 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC15.84■□□□□ 0.13
Vsx1Q91V10 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vsx1Q91V10 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC15.84■□□□□ 0.13
Vsx1Q91V10 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vsx1Q91V10 AC114585.2-202ENSMUST00000228094 426 ntBASIC15.84■□□□□ 0.13
Vsx1Q91V10 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vsx1Q91V10 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vsx1Q91V10 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC15.84■□□□□ 0.13
Vsx1Q91V10 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Vsx1Q91V10 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vsx1Q91V10 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Vsx1Q91V10 Gm3928-201ENSMUST00000121141 1307 ntBASIC15.84■□□□□ 0.13
Vsx1Q91V10 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vsx1Q91V10 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vsx1Q91V10 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Vsx1Q91V10 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vsx1Q91V10 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC15.84■□□□□ 0.13
Vsx1Q91V10 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vsx1Q91V10 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Vsx1Q91V10 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Vsx1Q91V10 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Vsx1Q91V10 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Vsx1Q91V10 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vsx1Q91V10 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vsx1Q91V10 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vsx1Q91V10 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vsx1Q91V10 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vsx1Q91V10 Gm14701-201ENSMUST00000117156 348 ntBASIC15.83■□□□□ 0.12
Vsx1Q91V10 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC15.83■□□□□ 0.12
Vsx1Q91V10 Gm15500-202ENSMUST00000071641 1019 ntBASIC15.83■□□□□ 0.12
Vsx1Q91V10 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vsx1Q91V10 Gm11841-201ENSMUST00000117060 1963 ntBASIC15.83■□□□□ 0.12
Vsx1Q91V10 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vsx1Q91V10 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Vsx1Q91V10 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vsx1Q91V10 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Vsx1Q91V10 Gm13127-201ENSMUST00000118978 1389 ntBASIC15.83■□□□□ 0.12
Vsx1Q91V10 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Vsx1Q91V10 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Vsx1Q91V10 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vsx1Q91V10 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Vsx1Q91V10 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
Vsx1Q91V10 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vsx1Q91V10 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vsx1Q91V10 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vsx1Q91V10 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Vsx1Q91V10 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Vsx1Q91V10 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vsx1Q91V10 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC15.82■□□□□ 0.12
Vsx1Q91V10 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vsx1Q91V10 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vsx1Q91V10 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC15.82■□□□□ 0.12
Vsx1Q91V10 Mir8117-201ENSMUST00000184773 107 ntBASIC15.82■□□□□ 0.12
Vsx1Q91V10 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC15.82■□□□□ 0.12
Vsx1Q91V10 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC15.82■□□□□ 0.12
Vsx1Q91V10 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vsx1Q91V10 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vsx1Q91V10 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vsx1Q91V10 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Vsx1Q91V10 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Vsx1Q91V10 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vsx1Q91V10 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vsx1Q91V10 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Vsx1Q91V10 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC15.82■□□□□ 0.12
Vsx1Q91V10 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vsx1Q91V10 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vsx1Q91V10 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vsx1Q91V10 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vsx1Q91V10 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vsx1Q91V10 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC15.81■□□□□ 0.12
Vsx1Q91V10 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vsx1Q91V10 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Vsx1Q91V10 Gm8349-201ENSMUST00000182720 1003 ntBASIC15.81■□□□□ 0.12
Vsx1Q91V10 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vsx1Q91V10 Gm45203-201ENSMUST00000206384 1831 ntBASIC15.81■□□□□ 0.12
Vsx1Q91V10 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vsx1Q91V10 Gm8784-201ENSMUST00000222096 1435 ntBASIC15.81■□□□□ 0.12
Vsx1Q91V10 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vsx1Q91V10 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vsx1Q91V10 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vsx1Q91V10 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vsx1Q91V10 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Vsx1Q91V10 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Vsx1Q91V10 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vsx1Q91V10 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vsx1Q91V10 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vsx1Q91V10 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vsx1Q91V10 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vsx1Q91V10 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms