Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rpp40Q8R1F9 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Rpp40Q8R1F9 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rpp40Q8R1F9 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rpp40Q8R1F9 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rpp40Q8R1F9 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rpp40Q8R1F9 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rpp40Q8R1F9 Gm4459-201ENSMUST00000118750 468 ntBASIC17.17■□□□□ 0.34
Rpp40Q8R1F9 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC17.17■□□□□ 0.34
Rpp40Q8R1F9 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC17.17■□□□□ 0.34
Rpp40Q8R1F9 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC17.17■□□□□ 0.34
Rpp40Q8R1F9 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.17■□□□□ 0.34
Rpp40Q8R1F9 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Rpp40Q8R1F9 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Rpp40Q8R1F9 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rpp40Q8R1F9 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rpp40Q8R1F9 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC17.17■□□□□ 0.34
Rpp40Q8R1F9 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rpp40Q8R1F9 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Rpp40Q8R1F9 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rpp40Q8R1F9 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rpp40Q8R1F9 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rpp40Q8R1F9 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rpp40Q8R1F9 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rpp40Q8R1F9 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rpp40Q8R1F9 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC17.16■□□□□ 0.34
Rpp40Q8R1F9 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Rpp40Q8R1F9 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rpp40Q8R1F9 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rpp40Q8R1F9 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rpp40Q8R1F9 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rpp40Q8R1F9 Gm11452-201ENSMUST00000122376 690 ntBASIC17.16■□□□□ 0.34
Rpp40Q8R1F9 Gm12497-201ENSMUST00000138778 237 ntBASIC17.16■□□□□ 0.34
Rpp40Q8R1F9 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rpp40Q8R1F9 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC17.16■□□□□ 0.34
Rpp40Q8R1F9 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rpp40Q8R1F9 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rpp40Q8R1F9 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rpp40Q8R1F9 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rpp40Q8R1F9 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rpp40Q8R1F9 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
Rpp40Q8R1F9 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rpp40Q8R1F9 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rpp40Q8R1F9 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rpp40Q8R1F9 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Rpp40Q8R1F9 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rpp40Q8R1F9 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Rpp40Q8R1F9 Gm37166-201ENSMUST00000195473 2474 ntBASIC17.15■□□□□ 0.34
Rpp40Q8R1F9 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rpp40Q8R1F9 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Rpp40Q8R1F9 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Rpp40Q8R1F9 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC17.15■□□□□ 0.34
Rpp40Q8R1F9 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Rpp40Q8R1F9 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
Rpp40Q8R1F9 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rpp40Q8R1F9 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Rpp40Q8R1F9 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC17.15■□□□□ 0.34
Rpp40Q8R1F9 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC17.15■□□□□ 0.34
Rpp40Q8R1F9 Gm13884-201ENSMUST00000118103 829 ntBASIC17.15■□□□□ 0.34
Rpp40Q8R1F9 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Rpp40Q8R1F9 Mir8098-201ENSMUST00000184011 137 ntBASIC17.15■□□□□ 0.34
Rpp40Q8R1F9 Gm6296-201ENSMUST00000222599 943 ntBASIC17.15■□□□□ 0.34
Rpp40Q8R1F9 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rpp40Q8R1F9 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Rpp40Q8R1F9 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC17.15■□□□□ 0.34
Rpp40Q8R1F9 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rpp40Q8R1F9 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rpp40Q8R1F9 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rpp40Q8R1F9 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rpp40Q8R1F9 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rpp40Q8R1F9 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rpp40Q8R1F9 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
Rpp40Q8R1F9 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Rpp40Q8R1F9 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Rpp40Q8R1F9 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rpp40Q8R1F9 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
Rpp40Q8R1F9 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Rpp40Q8R1F9 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rpp40Q8R1F9 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rpp40Q8R1F9 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rpp40Q8R1F9 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rpp40Q8R1F9 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC17.14■□□□□ 0.33
Rpp40Q8R1F9 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rpp40Q8R1F9 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rpp40Q8R1F9 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
Rpp40Q8R1F9 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC17.14■□□□□ 0.33
Rpp40Q8R1F9 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC17.14■□□□□ 0.33
Rpp40Q8R1F9 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
Rpp40Q8R1F9 Gm28659-201ENSMUST00000188013 759 ntBASIC17.14■□□□□ 0.33
Rpp40Q8R1F9 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rpp40Q8R1F9 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC17.14■□□□□ 0.33
Rpp40Q8R1F9 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
Rpp40Q8R1F9 Wnt10b-206ENSMUST00000228546 2709 ntBASIC17.14■□□□□ 0.33
Rpp40Q8R1F9 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rpp40Q8R1F9 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rpp40Q8R1F9 Rbfox2-206ENSMUST00000227314 1810 ntBASIC17.14■□□□□ 0.33
Rpp40Q8R1F9 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rpp40Q8R1F9 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
Rpp40Q8R1F9 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rpp40Q8R1F9 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms