Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Ddx54Q8K4L0 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC20.95■□□□□ 0.94
Ddx54Q8K4L0 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ddx54Q8K4L0 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ddx54Q8K4L0 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC20.95■□□□□ 0.94
Ddx54Q8K4L0 AC159621.2-201ENSMUST00000223519 1326 ntBASIC20.95■□□□□ 0.94
Ddx54Q8K4L0 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ddx54Q8K4L0 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Ddx54Q8K4L0 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ddx54Q8K4L0 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ddx54Q8K4L0 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ddx54Q8K4L0 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Ddx54Q8K4L0 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ddx54Q8K4L0 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ddx54Q8K4L0 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
Ddx54Q8K4L0 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC20.94■□□□□ 0.94
Ddx54Q8K4L0 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC20.94■□□□□ 0.94
Ddx54Q8K4L0 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Ddx54Q8K4L0 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Ddx54Q8K4L0 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Ddx54Q8K4L0 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Ddx54Q8K4L0 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Ddx54Q8K4L0 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ddx54Q8K4L0 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ddx54Q8K4L0 AC154767.3-201ENSMUST00000225150 1342 ntBASIC20.94■□□□□ 0.94
Ddx54Q8K4L0 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ddx54Q8K4L0 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ddx54Q8K4L0 CT025626.1-201ENSMUST00000223735 1455 ntBASIC20.94■□□□□ 0.94
Ddx54Q8K4L0 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Ddx54Q8K4L0 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ddx54Q8K4L0 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ddx54Q8K4L0 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ddx54Q8K4L0 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ddx54Q8K4L0 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ddx54Q8K4L0 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC20.93■□□□□ 0.94
Ddx54Q8K4L0 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ddx54Q8K4L0 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Ddx54Q8K4L0 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Ddx54Q8K4L0 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Ddx54Q8K4L0 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ddx54Q8K4L0 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ddx54Q8K4L0 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Ddx54Q8K4L0 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ddx54Q8K4L0 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ddx54Q8K4L0 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Ddx54Q8K4L0 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Ddx54Q8K4L0 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ddx54Q8K4L0 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ddx54Q8K4L0 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ddx54Q8K4L0 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ddx54Q8K4L0 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC20.92■□□□□ 0.94
Ddx54Q8K4L0 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Ddx54Q8K4L0 Thap2-203ENSMUST00000218989 527 ntBASIC20.92■□□□□ 0.94
Ddx54Q8K4L0 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ddx54Q8K4L0 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Ddx54Q8K4L0 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ddx54Q8K4L0 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ddx54Q8K4L0 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ddx54Q8K4L0 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC20.92■□□□□ 0.94
Ddx54Q8K4L0 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ddx54Q8K4L0 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Ddx54Q8K4L0 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Ddx54Q8K4L0 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ddx54Q8K4L0 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ddx54Q8K4L0 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ddx54Q8K4L0 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC20.91■□□□□ 0.94
Ddx54Q8K4L0 Grk6-207ENSMUST00000225925 2769 ntBASIC20.91■□□□□ 0.94
Ddx54Q8K4L0 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Ddx54Q8K4L0 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Ddx54Q8K4L0 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC20.91■□□□□ 0.94
Ddx54Q8K4L0 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC20.91■□□□□ 0.94
Ddx54Q8K4L0 Gm12151-201ENSMUST00000121374 290 ntBASIC20.91■□□□□ 0.94
Ddx54Q8K4L0 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Ddx54Q8K4L0 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Ddx54Q8K4L0 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC20.91■□□□□ 0.94
Ddx54Q8K4L0 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC20.91■□□□□ 0.94
Ddx54Q8K4L0 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ddx54Q8K4L0 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC20.91■□□□□ 0.94
Ddx54Q8K4L0 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Ddx54Q8K4L0 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Ddx54Q8K4L0 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ddx54Q8K4L0 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ddx54Q8K4L0 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ddx54Q8K4L0 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ddx54Q8K4L0 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ddx54Q8K4L0 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
Ddx54Q8K4L0 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ddx54Q8K4L0 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ddx54Q8K4L0 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ddx54Q8K4L0 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ddx54Q8K4L0 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Ddx54Q8K4L0 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ddx54Q8K4L0 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Ddx54Q8K4L0 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC20.9■□□□□ 0.94
Ddx54Q8K4L0 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ddx54Q8K4L0 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ddx54Q8K4L0 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ddx54Q8K4L0 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Ddx54Q8K4L0 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Ddx54Q8K4L0 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC20.9■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms