Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Clip4Q8CI96 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Clip4Q8CI96 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Clip4Q8CI96 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Clip4Q8CI96 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC16.21■□□□□ 0.19
Clip4Q8CI96 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Clip4Q8CI96 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC16.21■□□□□ 0.19
Clip4Q8CI96 Gm29518-201ENSMUST00000190858 372 ntBASIC16.21■□□□□ 0.19
Clip4Q8CI96 Gm7367-201ENSMUST00000057611 492 ntBASIC16.21■□□□□ 0.19
Clip4Q8CI96 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Clip4Q8CI96 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Clip4Q8CI96 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Clip4Q8CI96 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Clip4Q8CI96 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Clip4Q8CI96 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Clip4Q8CI96 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Clip4Q8CI96 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
Clip4Q8CI96 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
Clip4Q8CI96 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Clip4Q8CI96 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
Clip4Q8CI96 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Clip4Q8CI96 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Clip4Q8CI96 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Clip4Q8CI96 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clip4Q8CI96 Phf7-203ENSMUST00000226565 1971 ntBASIC16.2■□□□□ 0.18
Clip4Q8CI96 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clip4Q8CI96 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clip4Q8CI96 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC16.2■□□□□ 0.18
Clip4Q8CI96 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC16.2■□□□□ 0.18
Clip4Q8CI96 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Clip4Q8CI96 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Clip4Q8CI96 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
Clip4Q8CI96 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Clip4Q8CI96 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clip4Q8CI96 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clip4Q8CI96 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clip4Q8CI96 Gm11860-201ENSMUST00000122346 1010 ntBASIC16.2■□□□□ 0.18
Clip4Q8CI96 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Clip4Q8CI96 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Clip4Q8CI96 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
Clip4Q8CI96 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clip4Q8CI96 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clip4Q8CI96 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clip4Q8CI96 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clip4Q8CI96 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clip4Q8CI96 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Clip4Q8CI96 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.2■□□□□ 0.18
Clip4Q8CI96 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Clip4Q8CI96 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clip4Q8CI96 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
Clip4Q8CI96 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clip4Q8CI96 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC16.19■□□□□ 0.18
Clip4Q8CI96 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clip4Q8CI96 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clip4Q8CI96 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clip4Q8CI96 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clip4Q8CI96 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clip4Q8CI96 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clip4Q8CI96 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clip4Q8CI96 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clip4Q8CI96 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clip4Q8CI96 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clip4Q8CI96 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clip4Q8CI96 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clip4Q8CI96 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clip4Q8CI96 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Clip4Q8CI96 Gm6190-201ENSMUST00000220683 1374 ntBASIC16.19■□□□□ 0.18
Clip4Q8CI96 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clip4Q8CI96 Gm11336-201ENSMUST00000118168 334 ntBASIC16.19■□□□□ 0.18
Clip4Q8CI96 Gm17808-201ENSMUST00000200859 894 ntBASIC16.19■□□□□ 0.18
Clip4Q8CI96 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clip4Q8CI96 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC16.19■□□□□ 0.18
Clip4Q8CI96 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Clip4Q8CI96 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC16.19■□□□□ 0.18
Clip4Q8CI96 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clip4Q8CI96 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clip4Q8CI96 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.19■□□□□ 0.18
Clip4Q8CI96 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clip4Q8CI96 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Clip4Q8CI96 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clip4Q8CI96 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
Clip4Q8CI96 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clip4Q8CI96 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.19■□□□□ 0.18
Clip4Q8CI96 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clip4Q8CI96 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clip4Q8CI96 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC16.19■□□□□ 0.18
Clip4Q8CI96 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Clip4Q8CI96 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clip4Q8CI96 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clip4Q8CI96 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
Clip4Q8CI96 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clip4Q8CI96 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clip4Q8CI96 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clip4Q8CI96 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Clip4Q8CI96 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Clip4Q8CI96 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC16.18■□□□□ 0.18
Clip4Q8CI96 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Clip4Q8CI96 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Clip4Q8CI96 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Clip4Q8CI96 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms