Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC20.71■□□□□ 0.91
Rab11fip3Q8CHD8 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC20.71■□□□□ 0.91
Rab11fip3Q8CHD8 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC20.71■□□□□ 0.91
Rab11fip3Q8CHD8 AC117588.1-201ENSMUST00000228510 999 ntBASIC20.71■□□□□ 0.91
Rab11fip3Q8CHD8 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rab11fip3Q8CHD8 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Rab11fip3Q8CHD8 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Rab11fip3Q8CHD8 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rab11fip3Q8CHD8 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rab11fip3Q8CHD8 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rab11fip3Q8CHD8 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rab11fip3Q8CHD8 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Rab11fip3Q8CHD8 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rab11fip3Q8CHD8 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Rab11fip3Q8CHD8 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC20.7■□□□□ 0.9
Rab11fip3Q8CHD8 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rab11fip3Q8CHD8 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Rab11fip3Q8CHD8 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Rab11fip3Q8CHD8 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rab11fip3Q8CHD8 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rab11fip3Q8CHD8 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rab11fip3Q8CHD8 Gm11764-201ENSMUST00000120221 623 ntBASIC20.7■□□□□ 0.9
Rab11fip3Q8CHD8 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC20.7■□□□□ 0.9
Rab11fip3Q8CHD8 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rab11fip3Q8CHD8 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rab11fip3Q8CHD8 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC20.7■□□□□ 0.9
Rab11fip3Q8CHD8 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rab11fip3Q8CHD8 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rab11fip3Q8CHD8 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Rab11fip3Q8CHD8 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rab11fip3Q8CHD8 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rab11fip3Q8CHD8 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Rab11fip3Q8CHD8 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rab11fip3Q8CHD8 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Rab11fip3Q8CHD8 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rab11fip3Q8CHD8 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rab11fip3Q8CHD8 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rab11fip3Q8CHD8 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Rab11fip3Q8CHD8 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Rab11fip3Q8CHD8 Gm13036-201ENSMUST00000117799 748 ntBASIC20.69■□□□□ 0.9
Rab11fip3Q8CHD8 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC20.69■□□□□ 0.9
Rab11fip3Q8CHD8 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Rab11fip3Q8CHD8 Gm5712-201ENSMUST00000199748 1043 ntBASIC20.69■□□□□ 0.9
Rab11fip3Q8CHD8 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC20.69■□□□□ 0.9
Rab11fip3Q8CHD8 Psmb5-202ENSMUST00000227257 622 ntBASIC20.69■□□□□ 0.9
Rab11fip3Q8CHD8 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rab11fip3Q8CHD8 Gm15590-201ENSMUST00000078419 552 ntBASIC20.69■□□□□ 0.9
Rab11fip3Q8CHD8 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rab11fip3Q8CHD8 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Rab11fip3Q8CHD8 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rab11fip3Q8CHD8 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rab11fip3Q8CHD8 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Rab11fip3Q8CHD8 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rab11fip3Q8CHD8 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rab11fip3Q8CHD8 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
Rab11fip3Q8CHD8 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Rab11fip3Q8CHD8 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Rab11fip3Q8CHD8 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rab11fip3Q8CHD8 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Rab11fip3Q8CHD8 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Rab11fip3Q8CHD8 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rab11fip3Q8CHD8 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC20.68■□□□□ 0.9
Rab11fip3Q8CHD8 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC20.68■□□□□ 0.9
Rab11fip3Q8CHD8 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC20.68■□□□□ 0.9
Rab11fip3Q8CHD8 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rab11fip3Q8CHD8 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rab11fip3Q8CHD8 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rab11fip3Q8CHD8 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Rab11fip3Q8CHD8 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Rab11fip3Q8CHD8 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rab11fip3Q8CHD8 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rab11fip3Q8CHD8 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Rab11fip3Q8CHD8 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rab11fip3Q8CHD8 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC20.67■□□□□ 0.9
Rab11fip3Q8CHD8 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rab11fip3Q8CHD8 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Rab11fip3Q8CHD8 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Rab11fip3Q8CHD8 Gm27525-201ENSMUST00000184465 107 ntBASIC20.67■□□□□ 0.9
Rab11fip3Q8CHD8 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC20.67■□□□□ 0.9
Rab11fip3Q8CHD8 AC159106.1-201ENSMUST00000224421 690 ntBASIC20.67■□□□□ 0.9
Rab11fip3Q8CHD8 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
Rab11fip3Q8CHD8 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rab11fip3Q8CHD8 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rab11fip3Q8CHD8 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rab11fip3Q8CHD8 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rab11fip3Q8CHD8 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Rab11fip3Q8CHD8 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC20.67■□□□□ 0.9
Rab11fip3Q8CHD8 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC20.67■□□□□ 0.9
Rab11fip3Q8CHD8 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rab11fip3Q8CHD8 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Rab11fip3Q8CHD8 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rab11fip3Q8CHD8 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rab11fip3Q8CHD8 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC20.66■□□□□ 0.9
Rab11fip3Q8CHD8 Gm6184-201ENSMUST00000120403 1261 ntBASIC20.66■□□□□ 0.9
Rab11fip3Q8CHD8 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC20.66■□□□□ 0.9
Rab11fip3Q8CHD8 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rab11fip3Q8CHD8 Gm27646-201ENSMUST00000183989 110 ntBASIC20.66■□□□□ 0.9
Rab11fip3Q8CHD8 Gm5364-201ENSMUST00000216789 889 ntBASIC20.66■□□□□ 0.9
Rab11fip3Q8CHD8 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rab11fip3Q8CHD8 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms