Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Col6a6Q8C6K9 Best4-ps-201ENSMUST00000129783 1380 ntBASIC14.42□□□□□ -0.1
Col6a6Q8C6K9 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col6a6Q8C6K9 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Col6a6Q8C6K9 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Col6a6Q8C6K9 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC14.42□□□□□ -0.1
Col6a6Q8C6K9 AC093926.2-201ENSMUST00000214468 1228 ntBASIC14.42□□□□□ -0.1
Col6a6Q8C6K9 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Col6a6Q8C6K9 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col6a6Q8C6K9 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC14.42□□□□□ -0.1
Col6a6Q8C6K9 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col6a6Q8C6K9 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col6a6Q8C6K9 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col6a6Q8C6K9 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col6a6Q8C6K9 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col6a6Q8C6K9 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Col6a6Q8C6K9 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Col6a6Q8C6K9 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Col6a6Q8C6K9 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col6a6Q8C6K9 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col6a6Q8C6K9 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col6a6Q8C6K9 Gm13597-201ENSMUST00000121239 375 ntBASIC14.41□□□□□ -0.1
Col6a6Q8C6K9 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Col6a6Q8C6K9 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Col6a6Q8C6K9 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Col6a6Q8C6K9 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC14.41□□□□□ -0.1
Col6a6Q8C6K9 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col6a6Q8C6K9 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col6a6Q8C6K9 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col6a6Q8C6K9 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col6a6Q8C6K9 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col6a6Q8C6K9 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col6a6Q8C6K9 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Col6a6Q8C6K9 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col6a6Q8C6K9 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC14.41□□□□□ -0.1
Col6a6Q8C6K9 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col6a6Q8C6K9 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col6a6Q8C6K9 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col6a6Q8C6K9 Gm13616-201ENSMUST00000120600 222 ntBASIC14.41□□□□□ -0.1
Col6a6Q8C6K9 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Col6a6Q8C6K9 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Col6a6Q8C6K9 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col6a6Q8C6K9 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col6a6Q8C6K9 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col6a6Q8C6K9 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Col6a6Q8C6K9 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col6a6Q8C6K9 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col6a6Q8C6K9 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col6a6Q8C6K9 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col6a6Q8C6K9 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col6a6Q8C6K9 Wnt10b-206ENSMUST00000228546 2709 ntBASIC14.4□□□□□ -0.1
Col6a6Q8C6K9 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col6a6Q8C6K9 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Col6a6Q8C6K9 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Col6a6Q8C6K9 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Col6a6Q8C6K9 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col6a6Q8C6K9 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Col6a6Q8C6K9 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Col6a6Q8C6K9 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Col6a6Q8C6K9 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col6a6Q8C6K9 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Col6a6Q8C6K9 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Col6a6Q8C6K9 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col6a6Q8C6K9 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Col6a6Q8C6K9 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Col6a6Q8C6K9 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col6a6Q8C6K9 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Col6a6Q8C6K9 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Col6a6Q8C6K9 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col6a6Q8C6K9 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
Col6a6Q8C6K9 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC14.4□□□□□ -0.1
Col6a6Q8C6K9 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Col6a6Q8C6K9 Gm5253-201ENSMUST00000187104 1025 ntBASIC14.4□□□□□ -0.1
Col6a6Q8C6K9 Gm44492-201ENSMUST00000197012 141 ntBASIC14.4□□□□□ -0.1
Col6a6Q8C6K9 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Col6a6Q8C6K9 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col6a6Q8C6K9 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col6a6Q8C6K9 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Col6a6Q8C6K9 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col6a6Q8C6K9 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col6a6Q8C6K9 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
Col6a6Q8C6K9 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col6a6Q8C6K9 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Col6a6Q8C6K9 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Col6a6Q8C6K9 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Col6a6Q8C6K9 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Col6a6Q8C6K9 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col6a6Q8C6K9 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Col6a6Q8C6K9 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Col6a6Q8C6K9 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col6a6Q8C6K9 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Col6a6Q8C6K9 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC14.39□□□□□ -0.11
Col6a6Q8C6K9 Gm27300-201ENSMUST00000184085 97 ntBASIC14.39□□□□□ -0.11
Col6a6Q8C6K9 Gm27335-201ENSMUST00000184758 97 ntBASIC14.39□□□□□ -0.11
Col6a6Q8C6K9 Gm17968-201ENSMUST00000194902 784 ntBASIC14.39□□□□□ -0.11
Col6a6Q8C6K9 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col6a6Q8C6K9 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col6a6Q8C6K9 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col6a6Q8C6K9 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col6a6Q8C6K9 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms