Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tsen54Q8C2A2 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Tsen54Q8C2A2 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tsen54Q8C2A2 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tsen54Q8C2A2 Gm43352-201ENSMUST00000196419 3065 ntBASIC13.47□□□□□ -0.25
Tsen54Q8C2A2 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tsen54Q8C2A2 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tsen54Q8C2A2 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Tsen54Q8C2A2 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Tsen54Q8C2A2 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tsen54Q8C2A2 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tsen54Q8C2A2 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tsen54Q8C2A2 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tsen54Q8C2A2 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Tsen54Q8C2A2 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tsen54Q8C2A2 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tsen54Q8C2A2 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Tsen54Q8C2A2 Gm37820-201ENSMUST00000194021 2147 ntBASIC13.46□□□□□ -0.25
Tsen54Q8C2A2 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC13.46□□□□□ -0.25
Tsen54Q8C2A2 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tsen54Q8C2A2 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tsen54Q8C2A2 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tsen54Q8C2A2 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tsen54Q8C2A2 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
Tsen54Q8C2A2 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tsen54Q8C2A2 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Tsen54Q8C2A2 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tsen54Q8C2A2 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tsen54Q8C2A2 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tsen54Q8C2A2 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
Tsen54Q8C2A2 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tsen54Q8C2A2 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Tsen54Q8C2A2 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Tsen54Q8C2A2 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Tsen54Q8C2A2 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tsen54Q8C2A2 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tsen54Q8C2A2 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Tsen54Q8C2A2 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tsen54Q8C2A2 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tsen54Q8C2A2 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Tsen54Q8C2A2 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Tsen54Q8C2A2 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Tsen54Q8C2A2 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Tsen54Q8C2A2 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC13.46□□□□□ -0.26
Tsen54Q8C2A2 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Tsen54Q8C2A2 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tsen54Q8C2A2 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tsen54Q8C2A2 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tsen54Q8C2A2 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tsen54Q8C2A2 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tsen54Q8C2A2 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tsen54Q8C2A2 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Tsen54Q8C2A2 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tsen54Q8C2A2 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Tsen54Q8C2A2 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tsen54Q8C2A2 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC13.45□□□□□ -0.26
Tsen54Q8C2A2 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tsen54Q8C2A2 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tsen54Q8C2A2 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tsen54Q8C2A2 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Tsen54Q8C2A2 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tsen54Q8C2A2 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC13.45□□□□□ -0.26
Tsen54Q8C2A2 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC13.45□□□□□ -0.26
Tsen54Q8C2A2 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Tsen54Q8C2A2 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Tsen54Q8C2A2 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tsen54Q8C2A2 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Tsen54Q8C2A2 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tsen54Q8C2A2 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tsen54Q8C2A2 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tsen54Q8C2A2 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tsen54Q8C2A2 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tsen54Q8C2A2 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tsen54Q8C2A2 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tsen54Q8C2A2 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tsen54Q8C2A2 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Tsen54Q8C2A2 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Tsen54Q8C2A2 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Tsen54Q8C2A2 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Tsen54Q8C2A2 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Tsen54Q8C2A2 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tsen54Q8C2A2 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tsen54Q8C2A2 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Tsen54Q8C2A2 Gm10584-201ENSMUST00000207036 2628 ntBASIC13.44□□□□□ -0.26
Tsen54Q8C2A2 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tsen54Q8C2A2 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tsen54Q8C2A2 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Tsen54Q8C2A2 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tsen54Q8C2A2 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tsen54Q8C2A2 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Tsen54Q8C2A2 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Tsen54Q8C2A2 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Tsen54Q8C2A2 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tsen54Q8C2A2 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tsen54Q8C2A2 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tsen54Q8C2A2 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tsen54Q8C2A2 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tsen54Q8C2A2 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tsen54Q8C2A2 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tsen54Q8C2A2 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms