Protein–RNA interactions for Protein: Q8BWU1

Sprn, Shadow of prion protein, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SprnQ8BWU1 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SprnQ8BWU1 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SprnQ8BWU1 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC14.2□□□□□ -0.14
SprnQ8BWU1 Gm11539-201ENSMUST00000119837 557 ntBASIC14.2□□□□□ -0.14
SprnQ8BWU1 Gm13436-201ENSMUST00000120418 567 ntBASIC14.2□□□□□ -0.14
SprnQ8BWU1 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC14.2□□□□□ -0.14
SprnQ8BWU1 Gm10231-201ENSMUST00000181584 441 ntBASIC14.2□□□□□ -0.14
SprnQ8BWU1 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SprnQ8BWU1 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SprnQ8BWU1 Gm10175-202ENSMUST00000208752 441 ntBASIC14.2□□□□□ -0.14
SprnQ8BWU1 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
SprnQ8BWU1 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SprnQ8BWU1 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SprnQ8BWU1 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SprnQ8BWU1 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SprnQ8BWU1 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SprnQ8BWU1 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SprnQ8BWU1 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SprnQ8BWU1 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SprnQ8BWU1 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SprnQ8BWU1 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SprnQ8BWU1 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SprnQ8BWU1 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
SprnQ8BWU1 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SprnQ8BWU1 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SprnQ8BWU1 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
SprnQ8BWU1 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
SprnQ8BWU1 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.2□□□□□ -0.14
SprnQ8BWU1 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
SprnQ8BWU1 Gm37728-201ENSMUST00000195025 2292 ntBASIC14.2□□□□□ -0.14
SprnQ8BWU1 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SprnQ8BWU1 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SprnQ8BWU1 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SprnQ8BWU1 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
SprnQ8BWU1 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SprnQ8BWU1 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
SprnQ8BWU1 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SprnQ8BWU1 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SprnQ8BWU1 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SprnQ8BWU1 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SprnQ8BWU1 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
SprnQ8BWU1 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SprnQ8BWU1 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SprnQ8BWU1 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC14.19□□□□□ -0.14
SprnQ8BWU1 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SprnQ8BWU1 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC14.19□□□□□ -0.14
SprnQ8BWU1 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SprnQ8BWU1 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC14.19□□□□□ -0.14
SprnQ8BWU1 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SprnQ8BWU1 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SprnQ8BWU1 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC14.19□□□□□ -0.14
SprnQ8BWU1 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC14.19□□□□□ -0.14
SprnQ8BWU1 Timm23-208ENSMUST00000226683 750 ntBASIC14.19□□□□□ -0.14
SprnQ8BWU1 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SprnQ8BWU1 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
SprnQ8BWU1 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SprnQ8BWU1 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
SprnQ8BWU1 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SprnQ8BWU1 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SprnQ8BWU1 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SprnQ8BWU1 Gm45133-201ENSMUST00000207548 2773 ntBASIC14.19□□□□□ -0.14
SprnQ8BWU1 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SprnQ8BWU1 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SprnQ8BWU1 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SprnQ8BWU1 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SprnQ8BWU1 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC14.19□□□□□ -0.14
SprnQ8BWU1 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SprnQ8BWU1 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SprnQ8BWU1 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SprnQ8BWU1 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
SprnQ8BWU1 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SprnQ8BWU1 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
SprnQ8BWU1 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SprnQ8BWU1 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SprnQ8BWU1 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SprnQ8BWU1 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SprnQ8BWU1 Gm8668-201ENSMUST00000120559 1447 ntBASIC14.18□□□□□ -0.14
SprnQ8BWU1 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SprnQ8BWU1 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SprnQ8BWU1 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SprnQ8BWU1 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SprnQ8BWU1 Gm13559-201ENSMUST00000120476 863 ntBASIC14.18□□□□□ -0.14
SprnQ8BWU1 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC14.18□□□□□ -0.14
SprnQ8BWU1 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SprnQ8BWU1 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SprnQ8BWU1 Gm3375-201ENSMUST00000203929 796 ntBASIC14.18□□□□□ -0.14
SprnQ8BWU1 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC14.18□□□□□ -0.14
SprnQ8BWU1 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
SprnQ8BWU1 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SprnQ8BWU1 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
SprnQ8BWU1 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SprnQ8BWU1 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SprnQ8BWU1 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
SprnQ8BWU1 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SprnQ8BWU1 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
SprnQ8BWU1 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
SprnQ8BWU1 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SprnQ8BWU1 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SprnQ8BWU1 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
SprnQ8BWU1 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms