Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Gm33142-201ENSMUST00000193913 867 ntBASIC16.26■□□□□ 0.19
Usp43Q8BUM9 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Usp43Q8BUM9 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Usp43Q8BUM9 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp43Q8BUM9 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp43Q8BUM9 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp43Q8BUM9 Gm42473-201ENSMUST00000201056 2291 ntBASIC16.26■□□□□ 0.19
Usp43Q8BUM9 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp43Q8BUM9 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp43Q8BUM9 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp43Q8BUM9 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp43Q8BUM9 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Usp43Q8BUM9 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Usp43Q8BUM9 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp43Q8BUM9 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp43Q8BUM9 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp43Q8BUM9 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Usp43Q8BUM9 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Usp43Q8BUM9 AC153526.5-201ENSMUST00000218661 2147 ntBASIC16.25■□□□□ 0.19
Usp43Q8BUM9 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
Usp43Q8BUM9 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Usp43Q8BUM9 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Usp43Q8BUM9 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Usp43Q8BUM9 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Usp43Q8BUM9 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Usp43Q8BUM9 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Usp43Q8BUM9 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Usp43Q8BUM9 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
Usp43Q8BUM9 AC153794.1-201ENSMUST00000169148 126 ntBASIC16.25■□□□□ 0.19
Usp43Q8BUM9 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC16.25■□□□□ 0.19
Usp43Q8BUM9 Gm7977-201ENSMUST00000193787 748 ntBASIC16.25■□□□□ 0.19
Usp43Q8BUM9 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC16.25■□□□□ 0.19
Usp43Q8BUM9 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Usp43Q8BUM9 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Usp43Q8BUM9 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Usp43Q8BUM9 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Usp43Q8BUM9 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Usp43Q8BUM9 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Usp43Q8BUM9 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Usp43Q8BUM9 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Usp43Q8BUM9 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Usp43Q8BUM9 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Usp43Q8BUM9 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Usp43Q8BUM9 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Usp43Q8BUM9 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Usp43Q8BUM9 Gm7507-201ENSMUST00000183053 1008 ntBASIC16.24■□□□□ 0.19
Usp43Q8BUM9 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC16.24■□□□□ 0.19
Usp43Q8BUM9 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Usp43Q8BUM9 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Usp43Q8BUM9 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Usp43Q8BUM9 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC16.24■□□□□ 0.19
Usp43Q8BUM9 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Usp43Q8BUM9 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
Usp43Q8BUM9 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
Usp43Q8BUM9 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Usp43Q8BUM9 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Usp43Q8BUM9 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Usp43Q8BUM9 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Usp43Q8BUM9 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Usp43Q8BUM9 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Usp43Q8BUM9 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Usp43Q8BUM9 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Usp43Q8BUM9 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.23■□□□□ 0.19
Usp43Q8BUM9 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC16.23■□□□□ 0.19
Usp43Q8BUM9 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Usp43Q8BUM9 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Usp43Q8BUM9 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Usp43Q8BUM9 Gm7284-201ENSMUST00000131667 944 ntBASIC16.23■□□□□ 0.19
Usp43Q8BUM9 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC16.23■□□□□ 0.19
Usp43Q8BUM9 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Usp43Q8BUM9 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Usp43Q8BUM9 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Usp43Q8BUM9 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Usp43Q8BUM9 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Usp43Q8BUM9 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Usp43Q8BUM9 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Usp43Q8BUM9 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC16.23■□□□□ 0.19
Usp43Q8BUM9 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Usp43Q8BUM9 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Usp43Q8BUM9 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Usp43Q8BUM9 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Usp43Q8BUM9 AC093043.3-201ENSMUST00000226531 2273 ntBASIC16.22■□□□□ 0.19
Usp43Q8BUM9 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC16.22■□□□□ 0.19
Usp43Q8BUM9 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Usp43Q8BUM9 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Usp43Q8BUM9 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Usp43Q8BUM9 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Usp43Q8BUM9 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
Usp43Q8BUM9 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Usp43Q8BUM9 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Usp43Q8BUM9 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Usp43Q8BUM9 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Usp43Q8BUM9 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Usp43Q8BUM9 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Usp43Q8BUM9 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Usp43Q8BUM9 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC16.22■□□□□ 0.19
Usp43Q8BUM9 Mir3081-201ENSMUST00000175305 84 ntBASIC16.22■□□□□ 0.19
Usp43Q8BUM9 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Usp43Q8BUM9 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC16.22■□□□□ 0.19
Usp43Q8BUM9 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms