Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cpne3Q8BT60 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC15.53■□□□□ 0.08
Cpne3Q8BT60 Gm26039-201ENSMUST00000158152 144 ntBASIC15.53■□□□□ 0.08
Cpne3Q8BT60 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Cpne3Q8BT60 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC15.53■□□□□ 0.08
Cpne3Q8BT60 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC15.53■□□□□ 0.08
Cpne3Q8BT60 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cpne3Q8BT60 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cpne3Q8BT60 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cpne3Q8BT60 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cpne3Q8BT60 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cpne3Q8BT60 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cpne3Q8BT60 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cpne3Q8BT60 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cpne3Q8BT60 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cpne3Q8BT60 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC15.53■□□□□ 0.08
Cpne3Q8BT60 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cpne3Q8BT60 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cpne3Q8BT60 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cpne3Q8BT60 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Cpne3Q8BT60 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cpne3Q8BT60 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
Cpne3Q8BT60 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC15.53■□□□□ 0.08
Cpne3Q8BT60 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Cpne3Q8BT60 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cpne3Q8BT60 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cpne3Q8BT60 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Cpne3Q8BT60 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cpne3Q8BT60 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cpne3Q8BT60 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Cpne3Q8BT60 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Cpne3Q8BT60 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Cpne3Q8BT60 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cpne3Q8BT60 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cpne3Q8BT60 Mir1668-201ENSMUST00000184114 107 ntBASIC15.52■□□□□ 0.08
Cpne3Q8BT60 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC15.52■□□□□ 0.08
Cpne3Q8BT60 Gm45058-201ENSMUST00000205810 766 ntBASIC15.52■□□□□ 0.08
Cpne3Q8BT60 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cpne3Q8BT60 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cpne3Q8BT60 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cpne3Q8BT60 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cpne3Q8BT60 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cpne3Q8BT60 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cpne3Q8BT60 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cpne3Q8BT60 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC15.52■□□□□ 0.07
Cpne3Q8BT60 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cpne3Q8BT60 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cpne3Q8BT60 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Cpne3Q8BT60 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cpne3Q8BT60 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cpne3Q8BT60 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Cpne3Q8BT60 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC15.51■□□□□ 0.07
Cpne3Q8BT60 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cpne3Q8BT60 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Cpne3Q8BT60 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cpne3Q8BT60 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Cpne3Q8BT60 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Cpne3Q8BT60 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC15.51■□□□□ 0.07
Cpne3Q8BT60 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC15.51■□□□□ 0.07
Cpne3Q8BT60 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Cpne3Q8BT60 Gm29707-201ENSMUST00000196325 491 ntBASIC15.51■□□□□ 0.07
Cpne3Q8BT60 AC159205.3-201ENSMUST00000224614 874 ntBASIC15.51■□□□□ 0.07
Cpne3Q8BT60 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cpne3Q8BT60 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cpne3Q8BT60 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Cpne3Q8BT60 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cpne3Q8BT60 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC15.51■□□□□ 0.07
Cpne3Q8BT60 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC15.51■□□□□ 0.07
Cpne3Q8BT60 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cpne3Q8BT60 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Cpne3Q8BT60 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cpne3Q8BT60 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cpne3Q8BT60 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cpne3Q8BT60 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Cpne3Q8BT60 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cpne3Q8BT60 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Cpne3Q8BT60 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cpne3Q8BT60 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cpne3Q8BT60 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Cpne3Q8BT60 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cpne3Q8BT60 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cpne3Q8BT60 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cpne3Q8BT60 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cpne3Q8BT60 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cpne3Q8BT60 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC15.5■□□□□ 0.07
Cpne3Q8BT60 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cpne3Q8BT60 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC15.5■□□□□ 0.07
Cpne3Q8BT60 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cpne3Q8BT60 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC15.5■□□□□ 0.07
Cpne3Q8BT60 Gm15565-201ENSMUST00000118890 427 ntBASIC15.5■□□□□ 0.07
Cpne3Q8BT60 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC15.5■□□□□ 0.07
Cpne3Q8BT60 AC153881.2-201ENSMUST00000214877 204 ntBASIC15.5■□□□□ 0.07
Cpne3Q8BT60 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cpne3Q8BT60 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Cpne3Q8BT60 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cpne3Q8BT60 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cpne3Q8BT60 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cpne3Q8BT60 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cpne3Q8BT60 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cpne3Q8BT60 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms