Protein–RNA interactions for Protein: Q8BP99

UPF0500 protein C1orf216 homolog, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8BP99 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Q8BP99 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Q8BP99 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Q8BP99 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Q8BP99 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Q8BP99 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Q8BP99 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Q8BP99 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Q8BP99 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Q8BP99 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Q8BP99 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Q8BP99 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Q8BP99 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC15.82■□□□□ 0.12
Q8BP99 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Q8BP99 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Q8BP99 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC15.82■□□□□ 0.12
Q8BP99 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Q8BP99 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Q8BP99 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Q8BP99 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Q8BP99 Actl10-202ENSMUST00000226583 1501 ntBASIC15.82■□□□□ 0.12
Q8BP99 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC15.82■□□□□ 0.12
Q8BP99 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC15.82■□□□□ 0.12
Q8BP99 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Q8BP99 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Q8BP99 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Q8BP99 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Q8BP99 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Q8BP99 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Q8BP99 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Q8BP99 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Q8BP99 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Q8BP99 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Q8BP99 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Q8BP99 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Q8BP99 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Q8BP99 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Q8BP99 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Q8BP99 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Q8BP99 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Q8BP99 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Q8BP99 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC15.81■□□□□ 0.12
Q8BP99 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
Q8BP99 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Q8BP99 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Q8BP99 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Q8BP99 Gm6345-202ENSMUST00000180900 204 ntBASIC15.81■□□□□ 0.12
Q8BP99 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Q8BP99 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Q8BP99 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Q8BP99 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Q8BP99 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Q8BP99 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Q8BP99 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Q8BP99 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
Q8BP99 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Q8BP99 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Q8BP99 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Q8BP99 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Q8BP99 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Q8BP99 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Q8BP99 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Q8BP99 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Q8BP99 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Q8BP99 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Q8BP99 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Q8BP99 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Q8BP99 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Q8BP99 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Q8BP99 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Q8BP99 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Q8BP99 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Q8BP99 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Q8BP99 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC15.8■□□□□ 0.12
Q8BP99 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Q8BP99 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Q8BP99 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Q8BP99 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC15.8■□□□□ 0.12
Q8BP99 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Q8BP99 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Q8BP99 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Q8BP99 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Q8BP99 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Q8BP99 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Q8BP99 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
Q8BP99 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Q8BP99 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Q8BP99 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Q8BP99 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Q8BP99 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Q8BP99 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Q8BP99 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Q8BP99 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Q8BP99 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Q8BP99 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Q8BP99 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Q8BP99 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Q8BP99 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Q8BP99 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Q8BP99 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms