Protein–RNA interactions for Protein: Q8BK35

Nop53, Ribosome biogenesis protein NOP53, mousemouse

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop53Q8BK35 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nop53Q8BK35 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nop53Q8BK35 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC17.23■□□□□ 0.35
Nop53Q8BK35 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Nop53Q8BK35 Gm44450-201ENSMUST00000199528 114 ntBASIC17.23■□□□□ 0.35
Nop53Q8BK35 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nop53Q8BK35 AC159205.3-201ENSMUST00000224614 874 ntBASIC17.23■□□□□ 0.35
Nop53Q8BK35 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Nop53Q8BK35 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Nop53Q8BK35 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nop53Q8BK35 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Nop53Q8BK35 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nop53Q8BK35 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nop53Q8BK35 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Nop53Q8BK35 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nop53Q8BK35 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nop53Q8BK35 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Nop53Q8BK35 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nop53Q8BK35 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC17.23■□□□□ 0.35
Nop53Q8BK35 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nop53Q8BK35 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nop53Q8BK35 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC17.22■□□□□ 0.35
Nop53Q8BK35 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
Nop53Q8BK35 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Nop53Q8BK35 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nop53Q8BK35 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
Nop53Q8BK35 Gm6659-201ENSMUST00000174752 547 ntBASIC17.22■□□□□ 0.35
Nop53Q8BK35 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC17.22■□□□□ 0.35
Nop53Q8BK35 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC17.22■□□□□ 0.35
Nop53Q8BK35 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Nop53Q8BK35 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Nop53Q8BK35 Gm18032-201ENSMUST00000222541 538 ntBASIC17.22■□□□□ 0.35
Nop53Q8BK35 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nop53Q8BK35 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Nop53Q8BK35 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nop53Q8BK35 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nop53Q8BK35 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nop53Q8BK35 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
Nop53Q8BK35 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nop53Q8BK35 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nop53Q8BK35 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Nop53Q8BK35 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC17.22■□□□□ 0.35
Nop53Q8BK35 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nop53Q8BK35 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nop53Q8BK35 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nop53Q8BK35 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Nop53Q8BK35 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nop53Q8BK35 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nop53Q8BK35 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC17.21■□□□□ 0.35
Nop53Q8BK35 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Nop53Q8BK35 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nop53Q8BK35 Gm19430-201ENSMUST00000193847 2137 ntBASIC17.21■□□□□ 0.35
Nop53Q8BK35 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nop53Q8BK35 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nop53Q8BK35 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nop53Q8BK35 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Nop53Q8BK35 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nop53Q8BK35 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nop53Q8BK35 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Nop53Q8BK35 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nop53Q8BK35 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Nop53Q8BK35 Gm18421-201ENSMUST00000204122 625 ntBASIC17.21■□□□□ 0.35
Nop53Q8BK35 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nop53Q8BK35 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nop53Q8BK35 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nop53Q8BK35 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
Nop53Q8BK35 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Nop53Q8BK35 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Nop53Q8BK35 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
Nop53Q8BK35 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Nop53Q8BK35 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
Nop53Q8BK35 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Nop53Q8BK35 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Nop53Q8BK35 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nop53Q8BK35 Slc35b2-202ENSMUST00000223987 1766 ntBASIC17.2■□□□□ 0.34
Nop53Q8BK35 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nop53Q8BK35 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nop53Q8BK35 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Nop53Q8BK35 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC17.2■□□□□ 0.34
Nop53Q8BK35 Gm7213-201ENSMUST00000215977 950 ntBASIC17.2■□□□□ 0.34
Nop53Q8BK35 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nop53Q8BK35 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC17.2■□□□□ 0.34
Nop53Q8BK35 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nop53Q8BK35 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Nop53Q8BK35 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Nop53Q8BK35 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nop53Q8BK35 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nop53Q8BK35 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nop53Q8BK35 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nop53Q8BK35 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nop53Q8BK35 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Nop53Q8BK35 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Nop53Q8BK35 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Nop53Q8BK35 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nop53Q8BK35 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nop53Q8BK35 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Nop53Q8BK35 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nop53Q8BK35 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nop53Q8BK35 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nop53Q8BK35 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms