Protein–RNA interactions for Protein: Q8BI41

Synb, Syncytin-B, mousemouse

Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynbQ8BI41 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
SynbQ8BI41 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SynbQ8BI41 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SynbQ8BI41 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SynbQ8BI41 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
SynbQ8BI41 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC15.3■□□□□ 0.04
SynbQ8BI41 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SynbQ8BI41 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC15.3■□□□□ 0.04
SynbQ8BI41 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SynbQ8BI41 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC15.3■□□□□ 0.04
SynbQ8BI41 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SynbQ8BI41 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SynbQ8BI41 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SynbQ8BI41 Gm18206-201ENSMUST00000207027 926 ntBASIC15.3■□□□□ 0.04
SynbQ8BI41 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SynbQ8BI41 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
SynbQ8BI41 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SynbQ8BI41 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SynbQ8BI41 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SynbQ8BI41 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
SynbQ8BI41 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SynbQ8BI41 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
SynbQ8BI41 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
SynbQ8BI41 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC15.29■□□□□ 0.04
SynbQ8BI41 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SynbQ8BI41 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SynbQ8BI41 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SynbQ8BI41 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC15.29■□□□□ 0.04
SynbQ8BI41 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SynbQ8BI41 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC15.29■□□□□ 0.04
SynbQ8BI41 Gm5712-201ENSMUST00000199748 1043 ntBASIC15.29■□□□□ 0.04
SynbQ8BI41 Gm2651-201ENSMUST00000203560 838 ntBASIC15.29■□□□□ 0.04
SynbQ8BI41 Gm18421-201ENSMUST00000204122 625 ntBASIC15.29■□□□□ 0.04
SynbQ8BI41 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC15.29■□□□□ 0.04
SynbQ8BI41 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SynbQ8BI41 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SynbQ8BI41 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SynbQ8BI41 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SynbQ8BI41 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SynbQ8BI41 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SynbQ8BI41 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
SynbQ8BI41 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SynbQ8BI41 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SynbQ8BI41 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC15.28■□□□□ 0.04
SynbQ8BI41 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
SynbQ8BI41 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
SynbQ8BI41 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SynbQ8BI41 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SynbQ8BI41 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC15.28■□□□□ 0.04
SynbQ8BI41 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
SynbQ8BI41 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SynbQ8BI41 Gm25925-201ENSMUST00000158314 306 ntBASIC15.28■□□□□ 0.04
SynbQ8BI41 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SynbQ8BI41 Gm1818-201ENSMUST00000169406 1184 ntBASIC15.28■□□□□ 0.04
SynbQ8BI41 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC15.28■□□□□ 0.04
SynbQ8BI41 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
SynbQ8BI41 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SynbQ8BI41 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SynbQ8BI41 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
SynbQ8BI41 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SynbQ8BI41 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SynbQ8BI41 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SynbQ8BI41 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SynbQ8BI41 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SynbQ8BI41 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
SynbQ8BI41 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC15.27■□□□□ 0.04
SynbQ8BI41 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SynbQ8BI41 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SynbQ8BI41 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
SynbQ8BI41 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SynbQ8BI41 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SynbQ8BI41 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SynbQ8BI41 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
SynbQ8BI41 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
SynbQ8BI41 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SynbQ8BI41 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SynbQ8BI41 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
SynbQ8BI41 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC15.27■□□□□ 0.04
SynbQ8BI41 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC15.27■□□□□ 0.04
SynbQ8BI41 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC15.27■□□□□ 0.04
SynbQ8BI41 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SynbQ8BI41 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SynbQ8BI41 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
SynbQ8BI41 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SynbQ8BI41 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SynbQ8BI41 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
SynbQ8BI41 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC15.27■□□□□ 0.03
SynbQ8BI41 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SynbQ8BI41 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SynbQ8BI41 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SynbQ8BI41 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SynbQ8BI41 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SynbQ8BI41 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SynbQ8BI41 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SynbQ8BI41 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SynbQ8BI41 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SynbQ8BI41 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SynbQ8BI41 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SynbQ8BI41 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SynbQ8BI41 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms