Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC17.07■□□□□ 0.32
Trim6Q8BGE7 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
Trim6Q8BGE7 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim6Q8BGE7 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim6Q8BGE7 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim6Q8BGE7 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim6Q8BGE7 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim6Q8BGE7 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim6Q8BGE7 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trim6Q8BGE7 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim6Q8BGE7 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim6Q8BGE7 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Trim6Q8BGE7 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim6Q8BGE7 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim6Q8BGE7 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim6Q8BGE7 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim6Q8BGE7 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim6Q8BGE7 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim6Q8BGE7 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim6Q8BGE7 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim6Q8BGE7 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
Trim6Q8BGE7 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Trim6Q8BGE7 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim6Q8BGE7 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim6Q8BGE7 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim6Q8BGE7 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trim6Q8BGE7 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim6Q8BGE7 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim6Q8BGE7 Gm13186-201ENSMUST00000118031 316 ntBASIC17.05■□□□□ 0.32
Trim6Q8BGE7 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17.05■□□□□ 0.32
Trim6Q8BGE7 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim6Q8BGE7 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trim6Q8BGE7 CT025689.6-201ENSMUST00000224991 1104 ntBASIC17.05■□□□□ 0.32
Trim6Q8BGE7 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim6Q8BGE7 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC17.05■□□□□ 0.32
Trim6Q8BGE7 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim6Q8BGE7 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim6Q8BGE7 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim6Q8BGE7 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim6Q8BGE7 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trim6Q8BGE7 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim6Q8BGE7 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim6Q8BGE7 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim6Q8BGE7 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim6Q8BGE7 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC17.04■□□□□ 0.32
Trim6Q8BGE7 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim6Q8BGE7 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim6Q8BGE7 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.04■□□□□ 0.32
Trim6Q8BGE7 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim6Q8BGE7 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC17.04■□□□□ 0.32
Trim6Q8BGE7 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim6Q8BGE7 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Trim6Q8BGE7 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC17.04■□□□□ 0.32
Trim6Q8BGE7 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim6Q8BGE7 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Trim6Q8BGE7 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC17.04■□□□□ 0.32
Trim6Q8BGE7 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim6Q8BGE7 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim6Q8BGE7 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trim6Q8BGE7 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trim6Q8BGE7 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim6Q8BGE7 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC17.04■□□□□ 0.32
Trim6Q8BGE7 Gm3375-201ENSMUST00000203929 796 ntBASIC17.04■□□□□ 0.32
Trim6Q8BGE7 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim6Q8BGE7 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim6Q8BGE7 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim6Q8BGE7 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim6Q8BGE7 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC17.04■□□□□ 0.32
Trim6Q8BGE7 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim6Q8BGE7 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
Trim6Q8BGE7 Gm44443-201ENSMUST00000204396 5633 ntBASIC17.03■□□□□ 0.32
Trim6Q8BGE7 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.03■□□□□ 0.32
Trim6Q8BGE7 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Trim6Q8BGE7 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trim6Q8BGE7 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trim6Q8BGE7 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
Trim6Q8BGE7 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC17.03■□□□□ 0.32
Trim6Q8BGE7 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC17.03■□□□□ 0.32
Trim6Q8BGE7 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC17.03■□□□□ 0.32
Trim6Q8BGE7 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
Trim6Q8BGE7 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trim6Q8BGE7 Gm27463-201ENSMUST00000183569 57 ntBASIC17.03■□□□□ 0.32
Trim6Q8BGE7 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC17.03■□□□□ 0.32
Trim6Q8BGE7 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim6Q8BGE7 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim6Q8BGE7 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim6Q8BGE7 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim6Q8BGE7 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Trim6Q8BGE7 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim6Q8BGE7 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim6Q8BGE7 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Trim6Q8BGE7 Phf7-203ENSMUST00000226565 1971 ntBASIC17.02■□□□□ 0.32
Trim6Q8BGE7 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim6Q8BGE7 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim6Q8BGE7 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trim6Q8BGE7 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim6Q8BGE7 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim6Q8BGE7 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim6Q8BGE7 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
Trim6Q8BGE7 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms