Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vrk1Q80X41 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vrk1Q80X41 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Vrk1Q80X41 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vrk1Q80X41 Gm15590-201ENSMUST00000078419 552 ntBASIC15.3■□□□□ 0.04
Vrk1Q80X41 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vrk1Q80X41 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vrk1Q80X41 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Vrk1Q80X41 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vrk1Q80X41 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vrk1Q80X41 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Vrk1Q80X41 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC15.29■□□□□ 0.04
Vrk1Q80X41 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Vrk1Q80X41 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Vrk1Q80X41 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Vrk1Q80X41 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vrk1Q80X41 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Vrk1Q80X41 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vrk1Q80X41 Gm45774-201ENSMUST00000211992 2665 ntBASIC15.29■□□□□ 0.04
Vrk1Q80X41 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vrk1Q80X41 Gm6089-201ENSMUST00000197666 938 ntBASIC15.29■□□□□ 0.04
Vrk1Q80X41 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC15.29■□□□□ 0.04
Vrk1Q80X41 AC159093.1-201ENSMUST00000227779 380 ntBASIC15.29■□□□□ 0.04
Vrk1Q80X41 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vrk1Q80X41 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Vrk1Q80X41 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vrk1Q80X41 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Vrk1Q80X41 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vrk1Q80X41 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Vrk1Q80X41 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Vrk1Q80X41 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vrk1Q80X41 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vrk1Q80X41 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vrk1Q80X41 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vrk1Q80X41 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vrk1Q80X41 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vrk1Q80X41 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vrk1Q80X41 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Vrk1Q80X41 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Vrk1Q80X41 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vrk1Q80X41 Gm28265-201ENSMUST00000188201 2319 ntBASIC15.28■□□□□ 0.04
Vrk1Q80X41 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vrk1Q80X41 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vrk1Q80X41 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vrk1Q80X41 Gm16401-202ENSMUST00000197463 2074 ntBASIC15.28■□□□□ 0.04
Vrk1Q80X41 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC15.28■□□□□ 0.04
Vrk1Q80X41 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vrk1Q80X41 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Vrk1Q80X41 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vrk1Q80X41 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vrk1Q80X41 Gm11779-201ENSMUST00000118541 368 ntBASIC15.28■□□□□ 0.04
Vrk1Q80X41 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vrk1Q80X41 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC15.28■□□□□ 0.04
Vrk1Q80X41 Gm6550-201ENSMUST00000187574 993 ntBASIC15.28■□□□□ 0.04
Vrk1Q80X41 Gm5264-201ENSMUST00000190584 848 ntBASIC15.28■□□□□ 0.04
Vrk1Q80X41 Gm2213-201ENSMUST00000197485 688 ntBASIC15.28■□□□□ 0.04
Vrk1Q80X41 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC15.28■□□□□ 0.04
Vrk1Q80X41 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vrk1Q80X41 AV026068-213ENSMUST00000223675 1171 ntBASIC15.28■□□□□ 0.04
Vrk1Q80X41 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vrk1Q80X41 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vrk1Q80X41 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vrk1Q80X41 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vrk1Q80X41 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vrk1Q80X41 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vrk1Q80X41 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Vrk1Q80X41 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Vrk1Q80X41 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vrk1Q80X41 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Vrk1Q80X41 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vrk1Q80X41 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vrk1Q80X41 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Vrk1Q80X41 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
Vrk1Q80X41 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vrk1Q80X41 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Vrk1Q80X41 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Vrk1Q80X41 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC15.27■□□□□ 0.04
Vrk1Q80X41 Gm11780-201ENSMUST00000136880 516 ntBASIC15.27■□□□□ 0.04
Vrk1Q80X41 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC15.27■□□□□ 0.04
Vrk1Q80X41 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC15.27■□□□□ 0.04
Vrk1Q80X41 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC15.27■□□□□ 0.04
Vrk1Q80X41 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vrk1Q80X41 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Vrk1Q80X41 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC15.27■□□□□ 0.04
Vrk1Q80X41 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vrk1Q80X41 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vrk1Q80X41 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vrk1Q80X41 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Vrk1Q80X41 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Vrk1Q80X41 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Vrk1Q80X41 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.03
Vrk1Q80X41 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Vrk1Q80X41 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Vrk1Q80X41 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vrk1Q80X41 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vrk1Q80X41 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vrk1Q80X41 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vrk1Q80X41 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vrk1Q80X41 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vrk1Q80X41 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms