Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pif1Q80SX8 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pif1Q80SX8 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pif1Q80SX8 Gm15590-201ENSMUST00000078419 552 ntBASIC14.79□□□□□ -0.04
Pif1Q80SX8 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pif1Q80SX8 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pif1Q80SX8 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pif1Q80SX8 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pif1Q80SX8 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC14.78□□□□□ -0.04
Pif1Q80SX8 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pif1Q80SX8 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Pif1Q80SX8 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pif1Q80SX8 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pif1Q80SX8 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pif1Q80SX8 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pif1Q80SX8 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pif1Q80SX8 Gm11779-201ENSMUST00000118541 368 ntBASIC14.78□□□□□ -0.04
Pif1Q80SX8 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC14.78□□□□□ -0.04
Pif1Q80SX8 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pif1Q80SX8 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC14.78□□□□□ -0.04
Pif1Q80SX8 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC14.78□□□□□ -0.04
Pif1Q80SX8 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC14.78□□□□□ -0.04
Pif1Q80SX8 Psmb5-202ENSMUST00000227257 622 ntBASIC14.78□□□□□ -0.04
Pif1Q80SX8 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pif1Q80SX8 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pif1Q80SX8 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pif1Q80SX8 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pif1Q80SX8 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC14.78□□□□□ -0.04
Pif1Q80SX8 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pif1Q80SX8 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Pif1Q80SX8 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC14.77□□□□□ -0.04
Pif1Q80SX8 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pif1Q80SX8 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pif1Q80SX8 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Pif1Q80SX8 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pif1Q80SX8 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pif1Q80SX8 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pif1Q80SX8 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Pif1Q80SX8 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
Pif1Q80SX8 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pif1Q80SX8 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC14.77□□□□□ -0.05
Pif1Q80SX8 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC14.77□□□□□ -0.05
Pif1Q80SX8 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pif1Q80SX8 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pif1Q80SX8 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pif1Q80SX8 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Pif1Q80SX8 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Pif1Q80SX8 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC14.77□□□□□ -0.05
Pif1Q80SX8 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pif1Q80SX8 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Pif1Q80SX8 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pif1Q80SX8 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pif1Q80SX8 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pif1Q80SX8 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pif1Q80SX8 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Pif1Q80SX8 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Pif1Q80SX8 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pif1Q80SX8 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pif1Q80SX8 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pif1Q80SX8 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pif1Q80SX8 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pif1Q80SX8 Gm4459-201ENSMUST00000118750 468 ntBASIC14.76□□□□□ -0.05
Pif1Q80SX8 Gm15467-201ENSMUST00000120582 445 ntBASIC14.76□□□□□ -0.05
Pif1Q80SX8 Gm12497-201ENSMUST00000138778 237 ntBASIC14.76□□□□□ -0.05
Pif1Q80SX8 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pif1Q80SX8 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC14.76□□□□□ -0.05
Pif1Q80SX8 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pif1Q80SX8 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC14.76□□□□□ -0.05
Pif1Q80SX8 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC14.76□□□□□ -0.05
Pif1Q80SX8 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC14.76□□□□□ -0.05
Pif1Q80SX8 AC154757.1-201ENSMUST00000228289 336 ntBASIC14.76□□□□□ -0.05
Pif1Q80SX8 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pif1Q80SX8 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pif1Q80SX8 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pif1Q80SX8 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Pif1Q80SX8 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pif1Q80SX8 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC14.76□□□□□ -0.05
Pif1Q80SX8 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Pif1Q80SX8 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Pif1Q80SX8 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pif1Q80SX8 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pif1Q80SX8 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pif1Q80SX8 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pif1Q80SX8 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pif1Q80SX8 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pif1Q80SX8 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pif1Q80SX8 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pif1Q80SX8 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pif1Q80SX8 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pif1Q80SX8 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pif1Q80SX8 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pif1Q80SX8 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pif1Q80SX8 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC14.75□□□□□ -0.05
Pif1Q80SX8 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pif1Q80SX8 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC14.75□□□□□ -0.05
Pif1Q80SX8 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pif1Q80SX8 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pif1Q80SX8 Gm45774-201ENSMUST00000211992 2665 ntBASIC14.75□□□□□ -0.05
Pif1Q80SX8 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pif1Q80SX8 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms