Protein–RNA interactions for Protein: Q6PE54

Dhx40, Probable ATP-dependent RNA helicase DHX40, mousemouse

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dhx40Q6PE54 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Dhx40Q6PE54 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Dhx40Q6PE54 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Dhx40Q6PE54 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Dhx40Q6PE54 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Dhx40Q6PE54 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Dhx40Q6PE54 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Dhx40Q6PE54 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Dhx40Q6PE54 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Dhx40Q6PE54 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Dhx40Q6PE54 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Dhx40Q6PE54 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC17.86■□□□□ 0.45
Dhx40Q6PE54 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Dhx40Q6PE54 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Dhx40Q6PE54 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Dhx40Q6PE54 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Dhx40Q6PE54 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC17.86■□□□□ 0.45
Dhx40Q6PE54 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Dhx40Q6PE54 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Dhx40Q6PE54 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Dhx40Q6PE54 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC17.86■□□□□ 0.45
Dhx40Q6PE54 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
Dhx40Q6PE54 AC153881.2-201ENSMUST00000214877 204 ntBASIC17.86■□□□□ 0.45
Dhx40Q6PE54 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.86■□□□□ 0.45
Dhx40Q6PE54 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Dhx40Q6PE54 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Dhx40Q6PE54 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Dhx40Q6PE54 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Dhx40Q6PE54 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Dhx40Q6PE54 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
Dhx40Q6PE54 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Dhx40Q6PE54 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC17.86■□□□□ 0.45
Dhx40Q6PE54 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Dhx40Q6PE54 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Dhx40Q6PE54 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Dhx40Q6PE54 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Dhx40Q6PE54 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Dhx40Q6PE54 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Dhx40Q6PE54 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Dhx40Q6PE54 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Dhx40Q6PE54 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Dhx40Q6PE54 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
Dhx40Q6PE54 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Dhx40Q6PE54 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Dhx40Q6PE54 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Dhx40Q6PE54 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Dhx40Q6PE54 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Dhx40Q6PE54 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Dhx40Q6PE54 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Dhx40Q6PE54 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Dhx40Q6PE54 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Dhx40Q6PE54 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC17.84■□□□□ 0.45
Dhx40Q6PE54 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Dhx40Q6PE54 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Dhx40Q6PE54 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Dhx40Q6PE54 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Dhx40Q6PE54 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Dhx40Q6PE54 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Dhx40Q6PE54 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Dhx40Q6PE54 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Dhx40Q6PE54 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Dhx40Q6PE54 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Dhx40Q6PE54 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Dhx40Q6PE54 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Dhx40Q6PE54 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Dhx40Q6PE54 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Dhx40Q6PE54 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Dhx40Q6PE54 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Dhx40Q6PE54 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Dhx40Q6PE54 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Dhx40Q6PE54 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Dhx40Q6PE54 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Dhx40Q6PE54 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Dhx40Q6PE54 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Dhx40Q6PE54 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Dhx40Q6PE54 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Dhx40Q6PE54 BC037039-201ENSMUST00000192003 2205 ntBASIC17.84■□□□□ 0.45
Dhx40Q6PE54 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Dhx40Q6PE54 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Dhx40Q6PE54 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
Dhx40Q6PE54 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Dhx40Q6PE54 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Dhx40Q6PE54 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Dhx40Q6PE54 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC17.83■□□□□ 0.45
Dhx40Q6PE54 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Dhx40Q6PE54 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Dhx40Q6PE54 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Dhx40Q6PE54 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Dhx40Q6PE54 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Dhx40Q6PE54 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Dhx40Q6PE54 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Dhx40Q6PE54 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Dhx40Q6PE54 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Dhx40Q6PE54 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Dhx40Q6PE54 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Dhx40Q6PE54 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Dhx40Q6PE54 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Dhx40Q6PE54 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Dhx40Q6PE54 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Dhx40Q6PE54 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms