Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
Smarcc2Q6PDG5 Gm6858-201ENSMUST00000208582 1468 ntBASIC18.72■□□□□ 0.59
Smarcc2Q6PDG5 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smarcc2Q6PDG5 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC18.72■□□□□ 0.59
Smarcc2Q6PDG5 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
Smarcc2Q6PDG5 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smarcc2Q6PDG5 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smarcc2Q6PDG5 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smarcc2Q6PDG5 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smarcc2Q6PDG5 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
Smarcc2Q6PDG5 Gm44430-201ENSMUST00000203376 995 ntBASIC18.72■□□□□ 0.59
Smarcc2Q6PDG5 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Smarcc2Q6PDG5 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smarcc2Q6PDG5 AC125350.1-201ENSMUST00000225115 903 ntBASIC18.72■□□□□ 0.59
Smarcc2Q6PDG5 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Smarcc2Q6PDG5 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smarcc2Q6PDG5 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Smarcc2Q6PDG5 Gm42473-201ENSMUST00000201056 2291 ntBASIC18.72■□□□□ 0.59
Smarcc2Q6PDG5 AC093043.3-201ENSMUST00000226531 2273 ntBASIC18.72■□□□□ 0.59
Smarcc2Q6PDG5 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smarcc2Q6PDG5 AC132265.1-201ENSMUST00000219233 1665 ntBASIC18.72■□□□□ 0.59
Smarcc2Q6PDG5 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smarcc2Q6PDG5 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smarcc2Q6PDG5 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smarcc2Q6PDG5 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smarcc2Q6PDG5 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smarcc2Q6PDG5 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Smarcc2Q6PDG5 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Smarcc2Q6PDG5 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Smarcc2Q6PDG5 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smarcc2Q6PDG5 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smarcc2Q6PDG5 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smarcc2Q6PDG5 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smarcc2Q6PDG5 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smarcc2Q6PDG5 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC18.71■□□□□ 0.59
Smarcc2Q6PDG5 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Smarcc2Q6PDG5 Gm27357-201ENSMUST00000183754 135 ntBASIC18.71■□□□□ 0.59
Smarcc2Q6PDG5 Gm18669-201ENSMUST00000216049 778 ntBASIC18.71■□□□□ 0.59
Smarcc2Q6PDG5 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smarcc2Q6PDG5 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Smarcc2Q6PDG5 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
Smarcc2Q6PDG5 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Smarcc2Q6PDG5 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smarcc2Q6PDG5 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smarcc2Q6PDG5 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smarcc2Q6PDG5 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smarcc2Q6PDG5 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smarcc2Q6PDG5 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smarcc2Q6PDG5 Gm44729-201ENSMUST00000206759 2052 ntBASIC18.7■□□□□ 0.58
Smarcc2Q6PDG5 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smarcc2Q6PDG5 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC18.7■□□□□ 0.58
Smarcc2Q6PDG5 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Smarcc2Q6PDG5 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC18.7■□□□□ 0.58
Smarcc2Q6PDG5 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smarcc2Q6PDG5 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC18.7■□□□□ 0.58
Smarcc2Q6PDG5 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Smarcc2Q6PDG5 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
Smarcc2Q6PDG5 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smarcc2Q6PDG5 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smarcc2Q6PDG5 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smarcc2Q6PDG5 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smarcc2Q6PDG5 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC18.7■□□□□ 0.58
Smarcc2Q6PDG5 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smarcc2Q6PDG5 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smarcc2Q6PDG5 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smarcc2Q6PDG5 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Smarcc2Q6PDG5 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smarcc2Q6PDG5 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smarcc2Q6PDG5 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC18.69■□□□□ 0.58
Smarcc2Q6PDG5 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Smarcc2Q6PDG5 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smarcc2Q6PDG5 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC18.69■□□□□ 0.58
Smarcc2Q6PDG5 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smarcc2Q6PDG5 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC18.69■□□□□ 0.58
Smarcc2Q6PDG5 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Smarcc2Q6PDG5 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Smarcc2Q6PDG5 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smarcc2Q6PDG5 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Smarcc2Q6PDG5 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smarcc2Q6PDG5 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC18.69■□□□□ 0.58
Smarcc2Q6PDG5 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smarcc2Q6PDG5 AC133083.1-201ENSMUST00000221736 2209 ntBASIC18.69■□□□□ 0.58
Smarcc2Q6PDG5 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Smarcc2Q6PDG5 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smarcc2Q6PDG5 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smarcc2Q6PDG5 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Smarcc2Q6PDG5 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smarcc2Q6PDG5 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Smarcc2Q6PDG5 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Smarcc2Q6PDG5 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smarcc2Q6PDG5 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
Smarcc2Q6PDG5 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smarcc2Q6PDG5 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC18.68■□□□□ 0.58
Smarcc2Q6PDG5 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC18.68■□□□□ 0.58
Smarcc2Q6PDG5 Gm10052-201ENSMUST00000168019 960 ntBASIC18.68■□□□□ 0.58
Smarcc2Q6PDG5 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smarcc2Q6PDG5 Gm7729-201ENSMUST00000050143 801 ntBASIC18.68■□□□□ 0.58
Smarcc2Q6PDG5 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smarcc2Q6PDG5 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Smarcc2Q6PDG5 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms