Protein–RNA interactions for Protein: Q6P542

Abcf1, ATP-binding cassette sub-family F member 1, mousemouse

Known RBP Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf1Q6P542 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Abcf1Q6P542 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC18■□□□□ 0.47
Abcf1Q6P542 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC18■□□□□ 0.47
Abcf1Q6P542 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Abcf1Q6P542 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Abcf1Q6P542 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Abcf1Q6P542 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Abcf1Q6P542 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
Abcf1Q6P542 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Abcf1Q6P542 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Abcf1Q6P542 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Abcf1Q6P542 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Abcf1Q6P542 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC17.99■□□□□ 0.47
Abcf1Q6P542 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Abcf1Q6P542 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Abcf1Q6P542 Gm18101-201ENSMUST00000215769 548 ntBASIC17.99■□□□□ 0.47
Abcf1Q6P542 AC134329.2-201ENSMUST00000217897 428 ntBASIC17.99■□□□□ 0.47
Abcf1Q6P542 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Abcf1Q6P542 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC17.99■□□□□ 0.47
Abcf1Q6P542 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Abcf1Q6P542 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Abcf1Q6P542 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Abcf1Q6P542 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Abcf1Q6P542 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Abcf1Q6P542 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Abcf1Q6P542 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Abcf1Q6P542 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Abcf1Q6P542 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Abcf1Q6P542 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Abcf1Q6P542 Gm10013-201ENSMUST00000106074 672 ntBASIC17.98■□□□□ 0.47
Abcf1Q6P542 Gm13323-201ENSMUST00000120245 1151 ntBASIC17.98■□□□□ 0.47
Abcf1Q6P542 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.98■□□□□ 0.47
Abcf1Q6P542 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC17.98■□□□□ 0.47
Abcf1Q6P542 Gm22697-201ENSMUST00000175194 63 ntBASIC17.98■□□□□ 0.47
Abcf1Q6P542 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Abcf1Q6P542 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.98■□□□□ 0.47
Abcf1Q6P542 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Abcf1Q6P542 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17.98■□□□□ 0.47
Abcf1Q6P542 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Abcf1Q6P542 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Abcf1Q6P542 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Abcf1Q6P542 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Abcf1Q6P542 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Abcf1Q6P542 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Abcf1Q6P542 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC17.98■□□□□ 0.47
Abcf1Q6P542 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Abcf1Q6P542 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Abcf1Q6P542 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Abcf1Q6P542 Gm45212-201ENSMUST00000205831 3403 ntBASIC17.98■□□□□ 0.47
Abcf1Q6P542 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Abcf1Q6P542 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.98■□□□□ 0.47
Abcf1Q6P542 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
Abcf1Q6P542 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Abcf1Q6P542 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Abcf1Q6P542 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Abcf1Q6P542 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Abcf1Q6P542 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC17.97■□□□□ 0.47
Abcf1Q6P542 Gm7370-201ENSMUST00000219471 767 ntBASIC17.97■□□□□ 0.47
Abcf1Q6P542 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Abcf1Q6P542 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Abcf1Q6P542 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Abcf1Q6P542 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Abcf1Q6P542 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Abcf1Q6P542 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Abcf1Q6P542 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Abcf1Q6P542 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC17.96■□□□□ 0.47
Abcf1Q6P542 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC17.96■□□□□ 0.47
Abcf1Q6P542 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Abcf1Q6P542 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Abcf1Q6P542 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Abcf1Q6P542 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Abcf1Q6P542 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Abcf1Q6P542 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Abcf1Q6P542 AC159205.3-201ENSMUST00000224614 874 ntBASIC17.96■□□□□ 0.47
Abcf1Q6P542 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Abcf1Q6P542 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Abcf1Q6P542 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Abcf1Q6P542 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Abcf1Q6P542 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Abcf1Q6P542 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Abcf1Q6P542 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
Abcf1Q6P542 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Abcf1Q6P542 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Abcf1Q6P542 Gfra2-202ENSMUST00000227633 1480 ntBASIC17.95■□□□□ 0.46
Abcf1Q6P542 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Abcf1Q6P542 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Abcf1Q6P542 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Abcf1Q6P542 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Abcf1Q6P542 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Abcf1Q6P542 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Abcf1Q6P542 Gm18032-201ENSMUST00000222541 538 ntBASIC17.95■□□□□ 0.46
Abcf1Q6P542 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Abcf1Q6P542 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Abcf1Q6P542 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Abcf1Q6P542 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Abcf1Q6P542 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC17.95■□□□□ 0.46
Abcf1Q6P542 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Abcf1Q6P542 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC17.94■□□□□ 0.46
Abcf1Q6P542 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Abcf1Q6P542 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms