Protein–RNA interactions for Protein: Q61508

Ecm1, Extracellular matrix protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ecm1Q61508 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC17.72■□□□□ 0.43
Ecm1Q61508 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ecm1Q61508 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ecm1Q61508 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
Ecm1Q61508 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ecm1Q61508 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Ecm1Q61508 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ecm1Q61508 Best4-ps-201ENSMUST00000129783 1380 ntBASIC17.72■□□□□ 0.43
Ecm1Q61508 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC17.72■□□□□ 0.43
Ecm1Q61508 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC17.72■□□□□ 0.43
Ecm1Q61508 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC17.72■□□□□ 0.43
Ecm1Q61508 Gm19164-201ENSMUST00000210667 640 ntBASIC17.72■□□□□ 0.43
Ecm1Q61508 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Ecm1Q61508 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Ecm1Q61508 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ecm1Q61508 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ecm1Q61508 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
Ecm1Q61508 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ecm1Q61508 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ecm1Q61508 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ecm1Q61508 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
Ecm1Q61508 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ecm1Q61508 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ecm1Q61508 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ecm1Q61508 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ecm1Q61508 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ecm1Q61508 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ecm1Q61508 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ecm1Q61508 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Ecm1Q61508 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ecm1Q61508 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ecm1Q61508 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ecm1Q61508 Auts2-212ENSMUST00000178555 309 ntBASIC17.71■□□□□ 0.43
Ecm1Q61508 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC17.71■□□□□ 0.43
Ecm1Q61508 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Ecm1Q61508 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ecm1Q61508 AC154572.2-201ENSMUST00000225105 997 ntBASIC17.71■□□□□ 0.43
Ecm1Q61508 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ecm1Q61508 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC17.71■□□□□ 0.43
Ecm1Q61508 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ecm1Q61508 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ecm1Q61508 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ecm1Q61508 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ecm1Q61508 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Ecm1Q61508 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ecm1Q61508 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ecm1Q61508 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ecm1Q61508 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Ecm1Q61508 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ecm1Q61508 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC17.7■□□□□ 0.42
Ecm1Q61508 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ecm1Q61508 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC17.7■□□□□ 0.42
Ecm1Q61508 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
Ecm1Q61508 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ecm1Q61508 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ecm1Q61508 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.7■□□□□ 0.42
Ecm1Q61508 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Ecm1Q61508 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Ecm1Q61508 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ecm1Q61508 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ecm1Q61508 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ecm1Q61508 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Ecm1Q61508 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ecm1Q61508 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
Ecm1Q61508 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Ecm1Q61508 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ecm1Q61508 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ecm1Q61508 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ecm1Q61508 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Ecm1Q61508 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC17.69■□□□□ 0.42
Ecm1Q61508 Gm13597-201ENSMUST00000121239 375 ntBASIC17.69■□□□□ 0.42
Ecm1Q61508 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC17.69■□□□□ 0.42
Ecm1Q61508 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ecm1Q61508 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ecm1Q61508 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC17.69■□□□□ 0.42
Ecm1Q61508 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC17.69■□□□□ 0.42
Ecm1Q61508 Gm10576-201ENSMUST00000191927 825 ntBASIC17.69■□□□□ 0.42
Ecm1Q61508 Gm44492-201ENSMUST00000197012 141 ntBASIC17.69■□□□□ 0.42
Ecm1Q61508 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ecm1Q61508 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ecm1Q61508 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ecm1Q61508 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Ecm1Q61508 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ecm1Q61508 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Ecm1Q61508 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.69■□□□□ 0.42
Ecm1Q61508 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ecm1Q61508 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ecm1Q61508 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ecm1Q61508 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Ecm1Q61508 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC17.68■□□□□ 0.42
Ecm1Q61508 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ecm1Q61508 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ecm1Q61508 Gm15920-201ENSMUST00000118998 402 ntBASIC17.68■□□□□ 0.42
Ecm1Q61508 Gm17968-201ENSMUST00000194902 784 ntBASIC17.68■□□□□ 0.42
Ecm1Q61508 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ecm1Q61508 AC151836.1-202ENSMUST00000226259 753 ntBASIC17.68■□□□□ 0.42
Ecm1Q61508 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ecm1Q61508 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ecm1Q61508 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ecm1Q61508 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 90.3 ms