Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vsx2Q61412 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vsx2Q61412 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Vsx2Q61412 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Vsx2Q61412 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vsx2Q61412 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vsx2Q61412 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Vsx2Q61412 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vsx2Q61412 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vsx2Q61412 Gm10819-201ENSMUST00000099988 561 ntBASIC15.68■□□□□ 0.1
Vsx2Q61412 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vsx2Q61412 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vsx2Q61412 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vsx2Q61412 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vsx2Q61412 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Vsx2Q61412 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vsx2Q61412 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
Vsx2Q61412 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vsx2Q61412 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Vsx2Q61412 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vsx2Q61412 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vsx2Q61412 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vsx2Q61412 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vsx2Q61412 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Vsx2Q61412 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vsx2Q61412 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC15.67■□□□□ 0.1
Vsx2Q61412 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Vsx2Q61412 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vsx2Q61412 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Vsx2Q61412 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Vsx2Q61412 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Vsx2Q61412 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vsx2Q61412 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vsx2Q61412 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vsx2Q61412 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vsx2Q61412 Zkscan4-202ENSMUST00000225845 1506 ntBASIC15.67■□□□□ 0.1
Vsx2Q61412 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Vsx2Q61412 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Vsx2Q61412 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vsx2Q61412 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Vsx2Q61412 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Vsx2Q61412 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vsx2Q61412 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vsx2Q61412 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vsx2Q61412 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vsx2Q61412 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vsx2Q61412 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vsx2Q61412 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vsx2Q61412 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Vsx2Q61412 Gm10459-201ENSMUST00000202708 1155 ntBASIC15.66■□□□□ 0.1
Vsx2Q61412 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vsx2Q61412 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vsx2Q61412 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Vsx2Q61412 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vsx2Q61412 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Vsx2Q61412 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vsx2Q61412 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Vsx2Q61412 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Vsx2Q61412 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Vsx2Q61412 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vsx2Q61412 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vsx2Q61412 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC15.66■□□□□ 0.1
Vsx2Q61412 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vsx2Q61412 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Vsx2Q61412 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vsx2Q61412 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vsx2Q61412 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vsx2Q61412 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Vsx2Q61412 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC15.65■□□□□ 0.1
Vsx2Q61412 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vsx2Q61412 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC15.65■□□□□ 0.1
Vsx2Q61412 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
Vsx2Q61412 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vsx2Q61412 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Vsx2Q61412 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Vsx2Q61412 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC15.65■□□□□ 0.1
Vsx2Q61412 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vsx2Q61412 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vsx2Q61412 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vsx2Q61412 CT010478.1-201ENSMUST00000220747 2787 ntBASIC15.65■□□□□ 0.1
Vsx2Q61412 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vsx2Q61412 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Vsx2Q61412 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vsx2Q61412 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Vsx2Q61412 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vsx2Q61412 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Vsx2Q61412 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vsx2Q61412 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vsx2Q61412 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vsx2Q61412 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC15.64■□□□□ 0.09
Vsx2Q61412 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Vsx2Q61412 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vsx2Q61412 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vsx2Q61412 Ptprs-211ENSMUST00000223859 5588 ntBASIC15.64■□□□□ 0.09
Vsx2Q61412 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Vsx2Q61412 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vsx2Q61412 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vsx2Q61412 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vsx2Q61412 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Vsx2Q61412 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms