Protein–RNA interactions for Protein: Q61179

Irf9, Interferon regulatory factor 9, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf9Q61179 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC19.91■□□□□ 0.78
Irf9Q61179 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Irf9Q61179 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Irf9Q61179 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Irf9Q61179 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Irf9Q61179 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
Irf9Q61179 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Irf9Q61179 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
Irf9Q61179 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Irf9Q61179 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC19.91■□□□□ 0.78
Irf9Q61179 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC19.91■□□□□ 0.78
Irf9Q61179 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Irf9Q61179 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC19.91■□□□□ 0.78
Irf9Q61179 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC19.91■□□□□ 0.78
Irf9Q61179 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC19.91■□□□□ 0.78
Irf9Q61179 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Irf9Q61179 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Irf9Q61179 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Irf9Q61179 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Irf9Q61179 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Irf9Q61179 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Irf9Q61179 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Irf9Q61179 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Irf9Q61179 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Irf9Q61179 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Irf9Q61179 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Irf9Q61179 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Irf9Q61179 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Irf9Q61179 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Irf9Q61179 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Irf9Q61179 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Irf9Q61179 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Irf9Q61179 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Irf9Q61179 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Irf9Q61179 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Irf9Q61179 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Irf9Q61179 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Irf9Q61179 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Irf9Q61179 Gm7222-201ENSMUST00000117512 906 ntBASIC19.9■□□□□ 0.78
Irf9Q61179 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC19.9■□□□□ 0.78
Irf9Q61179 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC19.9■□□□□ 0.78
Irf9Q61179 Gm6257-201ENSMUST00000163864 910 ntBASIC19.9■□□□□ 0.78
Irf9Q61179 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Irf9Q61179 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC19.9■□□□□ 0.78
Irf9Q61179 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC19.9■□□□□ 0.78
Irf9Q61179 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC19.9■□□□□ 0.78
Irf9Q61179 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Irf9Q61179 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Irf9Q61179 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Irf9Q61179 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Irf9Q61179 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Irf9Q61179 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Irf9Q61179 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Irf9Q61179 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Irf9Q61179 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Irf9Q61179 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Irf9Q61179 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Irf9Q61179 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Irf9Q61179 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC19.9■□□□□ 0.78
Irf9Q61179 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Irf9Q61179 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Irf9Q61179 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Irf9Q61179 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Irf9Q61179 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Irf9Q61179 Wnt10b-206ENSMUST00000228546 2709 ntBASIC19.89■□□□□ 0.78
Irf9Q61179 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
Irf9Q61179 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Irf9Q61179 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Irf9Q61179 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Irf9Q61179 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
Irf9Q61179 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Irf9Q61179 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Irf9Q61179 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Irf9Q61179 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Irf9Q61179 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Irf9Q61179 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Irf9Q61179 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC19.89■□□□□ 0.77
Irf9Q61179 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Irf9Q61179 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Irf9Q61179 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Irf9Q61179 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Irf9Q61179 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Irf9Q61179 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Irf9Q61179 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Irf9Q61179 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC19.88■□□□□ 0.77
Irf9Q61179 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Irf9Q61179 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Irf9Q61179 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Irf9Q61179 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Irf9Q61179 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Irf9Q61179 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Irf9Q61179 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Irf9Q61179 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Irf9Q61179 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Irf9Q61179 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Irf9Q61179 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC19.88■□□□□ 0.77
Irf9Q61179 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Irf9Q61179 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC19.88■□□□□ 0.77
Irf9Q61179 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Irf9Q61179 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms