Protein–RNA interactions for Protein: Q5XF90

Atp13a4, Probable cation-transporting ATPase 13A4, mousemouse

Predictions only

Length 1,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp13a4Q5XF90 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Atp13a4Q5XF90 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Atp13a4Q5XF90 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Atp13a4Q5XF90 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC17.36■□□□□ 0.37
Atp13a4Q5XF90 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Atp13a4Q5XF90 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Atp13a4Q5XF90 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Atp13a4Q5XF90 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Atp13a4Q5XF90 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Atp13a4Q5XF90 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atp13a4Q5XF90 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atp13a4Q5XF90 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atp13a4Q5XF90 Wnt10b-206ENSMUST00000228546 2709 ntBASIC17.35■□□□□ 0.37
Atp13a4Q5XF90 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atp13a4Q5XF90 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atp13a4Q5XF90 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Atp13a4Q5XF90 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atp13a4Q5XF90 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Atp13a4Q5XF90 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC17.35■□□□□ 0.37
Atp13a4Q5XF90 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atp13a4Q5XF90 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atp13a4Q5XF90 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC17.35■□□□□ 0.37
Atp13a4Q5XF90 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC17.35■□□□□ 0.37
Atp13a4Q5XF90 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atp13a4Q5XF90 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Atp13a4Q5XF90 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atp13a4Q5XF90 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atp13a4Q5XF90 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atp13a4Q5XF90 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atp13a4Q5XF90 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atp13a4Q5XF90 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atp13a4Q5XF90 Gm44729-201ENSMUST00000206759 2052 ntBASIC17.35■□□□□ 0.37
Atp13a4Q5XF90 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atp13a4Q5XF90 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Atp13a4Q5XF90 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC17.34■□□□□ 0.37
Atp13a4Q5XF90 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Atp13a4Q5XF90 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC17.34■□□□□ 0.37
Atp13a4Q5XF90 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC17.34■□□□□ 0.37
Atp13a4Q5XF90 Gm14859-201ENSMUST00000117752 357 ntBASIC17.34■□□□□ 0.37
Atp13a4Q5XF90 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC17.34■□□□□ 0.37
Atp13a4Q5XF90 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Atp13a4Q5XF90 Mir3081-201ENSMUST00000175305 84 ntBASIC17.34■□□□□ 0.37
Atp13a4Q5XF90 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Atp13a4Q5XF90 AC093043.3-201ENSMUST00000226531 2273 ntBASIC17.34■□□□□ 0.37
Atp13a4Q5XF90 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Atp13a4Q5XF90 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Atp13a4Q5XF90 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Atp13a4Q5XF90 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Atp13a4Q5XF90 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Atp13a4Q5XF90 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Atp13a4Q5XF90 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Atp13a4Q5XF90 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Atp13a4Q5XF90 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Atp13a4Q5XF90 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Atp13a4Q5XF90 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Atp13a4Q5XF90 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Atp13a4Q5XF90 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Atp13a4Q5XF90 Gm42918-201ENSMUST00000199249 1580 ntBASIC17.33■□□□□ 0.37
Atp13a4Q5XF90 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
Atp13a4Q5XF90 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Atp13a4Q5XF90 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC17.33■□□□□ 0.36
Atp13a4Q5XF90 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Atp13a4Q5XF90 Gm7507-201ENSMUST00000183053 1008 ntBASIC17.33■□□□□ 0.36
Atp13a4Q5XF90 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC17.33■□□□□ 0.36
Atp13a4Q5XF90 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Atp13a4Q5XF90 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Atp13a4Q5XF90 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Atp13a4Q5XF90 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Atp13a4Q5XF90 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
Atp13a4Q5XF90 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Atp13a4Q5XF90 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Atp13a4Q5XF90 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Atp13a4Q5XF90 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Atp13a4Q5XF90 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Atp13a4Q5XF90 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Atp13a4Q5XF90 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Atp13a4Q5XF90 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Atp13a4Q5XF90 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atp13a4Q5XF90 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Atp13a4Q5XF90 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atp13a4Q5XF90 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atp13a4Q5XF90 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atp13a4Q5XF90 AC153526.5-201ENSMUST00000218661 2147 ntBASIC17.32■□□□□ 0.36
Atp13a4Q5XF90 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atp13a4Q5XF90 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atp13a4Q5XF90 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atp13a4Q5XF90 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atp13a4Q5XF90 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Atp13a4Q5XF90 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atp13a4Q5XF90 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atp13a4Q5XF90 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atp13a4Q5XF90 Mir6404-201ENSMUST00000183699 94 ntBASIC17.32■□□□□ 0.36
Atp13a4Q5XF90 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC17.32■□□□□ 0.36
Atp13a4Q5XF90 AC130671.1-201ENSMUST00000227384 1237 ntBASIC17.32■□□□□ 0.36
Atp13a4Q5XF90 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atp13a4Q5XF90 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atp13a4Q5XF90 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Atp13a4Q5XF90 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atp13a4Q5XF90 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atp13a4Q5XF90 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms