Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav2Q5R1I9 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav2Q5R1I9 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav2Q5R1I9 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav2Q5R1I9 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav2Q5R1I9 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC12.8□□□□□ -0.36
Trav2Q5R1I9 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav2Q5R1I9 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC12.8□□□□□ -0.36
Trav2Q5R1I9 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC12.8□□□□□ -0.36
Trav2Q5R1I9 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav2Q5R1I9 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav2Q5R1I9 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC12.8□□□□□ -0.36
Trav2Q5R1I9 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav2Q5R1I9 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC12.8□□□□□ -0.36
Trav2Q5R1I9 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC12.8□□□□□ -0.36
Trav2Q5R1I9 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav2Q5R1I9 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav2Q5R1I9 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav2Q5R1I9 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
Trav2Q5R1I9 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav2Q5R1I9 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC12.8□□□□□ -0.36
Trav2Q5R1I9 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav2Q5R1I9 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav2Q5R1I9 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav2Q5R1I9 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav2Q5R1I9 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav2Q5R1I9 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav2Q5R1I9 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav2Q5R1I9 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav2Q5R1I9 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav2Q5R1I9 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav2Q5R1I9 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav2Q5R1I9 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav2Q5R1I9 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC12.79□□□□□ -0.36
Trav2Q5R1I9 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav2Q5R1I9 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav2Q5R1I9 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav2Q5R1I9 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav2Q5R1I9 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Trav2Q5R1I9 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC12.79□□□□□ -0.36
Trav2Q5R1I9 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC12.79□□□□□ -0.36
Trav2Q5R1I9 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav2Q5R1I9 Gm25745-201ENSMUST00000174945 133 ntBASIC12.79□□□□□ -0.36
Trav2Q5R1I9 AC133598.3-202ENSMUST00000224219 531 ntBASIC12.79□□□□□ -0.36
Trav2Q5R1I9 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav2Q5R1I9 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Trav2Q5R1I9 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Trav2Q5R1I9 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC12.79□□□□□ -0.36
Trav2Q5R1I9 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav2Q5R1I9 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav2Q5R1I9 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav2Q5R1I9 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav2Q5R1I9 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Trav2Q5R1I9 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Trav2Q5R1I9 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav2Q5R1I9 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav2Q5R1I9 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav2Q5R1I9 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav2Q5R1I9 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Trav2Q5R1I9 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav2Q5R1I9 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Trav2Q5R1I9 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Trav2Q5R1I9 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav2Q5R1I9 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav2Q5R1I9 Gm11452-201ENSMUST00000122376 690 ntBASIC12.78□□□□□ -0.36
Trav2Q5R1I9 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav2Q5R1I9 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav2Q5R1I9 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC12.78□□□□□ -0.36
Trav2Q5R1I9 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav2Q5R1I9 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC12.78□□□□□ -0.36
Trav2Q5R1I9 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC12.78□□□□□ -0.36
Trav2Q5R1I9 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav2Q5R1I9 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav2Q5R1I9 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav2Q5R1I9 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav2Q5R1I9 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav2Q5R1I9 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Trav2Q5R1I9 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav2Q5R1I9 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav2Q5R1I9 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav2Q5R1I9 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Trav2Q5R1I9 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Trav2Q5R1I9 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav2Q5R1I9 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Trav2Q5R1I9 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav2Q5R1I9 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC12.77□□□□□ -0.36
Trav2Q5R1I9 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
Trav2Q5R1I9 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav2Q5R1I9 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav2Q5R1I9 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav2Q5R1I9 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav2Q5R1I9 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav2Q5R1I9 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav2Q5R1I9 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav2Q5R1I9 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav2Q5R1I9 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav2Q5R1I9 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC12.77□□□□□ -0.37
Trav2Q5R1I9 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC12.77□□□□□ -0.37
Trav2Q5R1I9 AC160338.1-201ENSMUST00000214232 705 ntBASIC12.77□□□□□ -0.37
Trav2Q5R1I9 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms