Protein–RNA interactions for Protein: Q5R1I3

Trav7-2, T cell receptor alpha variable 7-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-2Q5R1I3 Gm7213-201ENSMUST00000215977 950 ntBASIC11.98□□□□□ -0.49
Trav7-2Q5R1I3 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav7-2Q5R1I3 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav7-2Q5R1I3 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Trav7-2Q5R1I3 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav7-2Q5R1I3 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav7-2Q5R1I3 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav7-2Q5R1I3 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav7-2Q5R1I3 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav7-2Q5R1I3 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav7-2Q5R1I3 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav7-2Q5R1I3 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav7-2Q5R1I3 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC11.97□□□□□ -0.49
Trav7-2Q5R1I3 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav7-2Q5R1I3 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
Trav7-2Q5R1I3 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Trav7-2Q5R1I3 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav7-2Q5R1I3 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav7-2Q5R1I3 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav7-2Q5R1I3 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav7-2Q5R1I3 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav7-2Q5R1I3 Sybu-209ENSMUST00000228639 4113 ntBASIC11.97□□□□□ -0.49
Trav7-2Q5R1I3 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav7-2Q5R1I3 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav7-2Q5R1I3 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav7-2Q5R1I3 AC133083.1-201ENSMUST00000221736 2209 ntBASIC11.97□□□□□ -0.49
Trav7-2Q5R1I3 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav7-2Q5R1I3 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC11.97□□□□□ -0.49
Trav7-2Q5R1I3 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav7-2Q5R1I3 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav7-2Q5R1I3 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Trav7-2Q5R1I3 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Trav7-2Q5R1I3 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Trav7-2Q5R1I3 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC11.97□□□□□ -0.49
Trav7-2Q5R1I3 Gm29994-201ENSMUST00000195495 1193 ntBASIC11.97□□□□□ -0.49
Trav7-2Q5R1I3 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
Trav7-2Q5R1I3 AC134329.2-201ENSMUST00000217897 428 ntBASIC11.97□□□□□ -0.49
Trav7-2Q5R1I3 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC11.97□□□□□ -0.49
Trav7-2Q5R1I3 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav7-2Q5R1I3 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Trav7-2Q5R1I3 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav7-2Q5R1I3 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav7-2Q5R1I3 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav7-2Q5R1I3 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav7-2Q5R1I3 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav7-2Q5R1I3 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC11.97□□□□□ -0.49
Trav7-2Q5R1I3 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav7-2Q5R1I3 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav7-2Q5R1I3 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav7-2Q5R1I3 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav7-2Q5R1I3 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav7-2Q5R1I3 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav7-2Q5R1I3 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Trav7-2Q5R1I3 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav7-2Q5R1I3 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav7-2Q5R1I3 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav7-2Q5R1I3 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav7-2Q5R1I3 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav7-2Q5R1I3 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav7-2Q5R1I3 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav7-2Q5R1I3 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav7-2Q5R1I3 Gm13186-201ENSMUST00000118031 316 ntBASIC11.96□□□□□ -0.49
Trav7-2Q5R1I3 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav7-2Q5R1I3 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav7-2Q5R1I3 Krtap5-1-202ENSMUST00000188274 742 ntBASIC11.96□□□□□ -0.49
Trav7-2Q5R1I3 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav7-2Q5R1I3 Gm18115-201ENSMUST00000221209 621 ntBASIC11.96□□□□□ -0.49
Trav7-2Q5R1I3 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav7-2Q5R1I3 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav7-2Q5R1I3 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav7-2Q5R1I3 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav7-2Q5R1I3 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav7-2Q5R1I3 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav7-2Q5R1I3 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav7-2Q5R1I3 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Trav7-2Q5R1I3 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav7-2Q5R1I3 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.5
Trav7-2Q5R1I3 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Trav7-2Q5R1I3 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav7-2Q5R1I3 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav7-2Q5R1I3 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Trav7-2Q5R1I3 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav7-2Q5R1I3 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav7-2Q5R1I3 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav7-2Q5R1I3 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC11.95□□□□□ -0.5
Trav7-2Q5R1I3 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav7-2Q5R1I3 Gm38042-201ENSMUST00000191614 5208 ntBASIC11.95□□□□□ -0.5
Trav7-2Q5R1I3 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav7-2Q5R1I3 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Trav7-2Q5R1I3 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Trav7-2Q5R1I3 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav7-2Q5R1I3 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Trav7-2Q5R1I3 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav7-2Q5R1I3 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav7-2Q5R1I3 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC11.95□□□□□ -0.5
Trav7-2Q5R1I3 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav7-2Q5R1I3 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav7-2Q5R1I3 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Trav7-2Q5R1I3 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC11.95□□□□□ -0.5
Trav7-2Q5R1I3 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms