Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6d-4Q5R1I0 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6d-4Q5R1I0 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6d-4Q5R1I0 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6d-4Q5R1I0 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6d-4Q5R1I0 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6d-4Q5R1I0 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
Trav6d-4Q5R1I0 Gm13884-201ENSMUST00000118103 829 ntBASIC13.46□□□□□ -0.25
Trav6d-4Q5R1I0 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC13.46□□□□□ -0.25
Trav6d-4Q5R1I0 Gm25406-201ENSMUST00000157599 105 ntBASIC13.46□□□□□ -0.25
Trav6d-4Q5R1I0 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Trav6d-4Q5R1I0 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC13.46□□□□□ -0.25
Trav6d-4Q5R1I0 Vti1a-206ENSMUST00000225529 1244 ntBASIC13.46□□□□□ -0.25
Trav6d-4Q5R1I0 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Trav6d-4Q5R1I0 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6d-4Q5R1I0 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Trav6d-4Q5R1I0 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav6d-4Q5R1I0 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Trav6d-4Q5R1I0 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav6d-4Q5R1I0 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Trav6d-4Q5R1I0 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Trav6d-4Q5R1I0 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav6d-4Q5R1I0 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6d-4Q5R1I0 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6d-4Q5R1I0 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC13.45□□□□□ -0.26
Trav6d-4Q5R1I0 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6d-4Q5R1I0 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6d-4Q5R1I0 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC13.45□□□□□ -0.26
Trav6d-4Q5R1I0 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6d-4Q5R1I0 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6d-4Q5R1I0 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6d-4Q5R1I0 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6d-4Q5R1I0 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Trav6d-4Q5R1I0 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Trav6d-4Q5R1I0 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC13.45□□□□□ -0.26
Trav6d-4Q5R1I0 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC13.45□□□□□ -0.26
Trav6d-4Q5R1I0 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6d-4Q5R1I0 Gm9172-201ENSMUST00000212092 954 ntBASIC13.45□□□□□ -0.26
Trav6d-4Q5R1I0 AC133598.3-202ENSMUST00000224219 531 ntBASIC13.45□□□□□ -0.26
Trav6d-4Q5R1I0 Rps4l-201ENSMUST00000071745 943 ntBASIC13.45□□□□□ -0.26
Trav6d-4Q5R1I0 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6d-4Q5R1I0 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6d-4Q5R1I0 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6d-4Q5R1I0 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6d-4Q5R1I0 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6d-4Q5R1I0 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6d-4Q5R1I0 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6d-4Q5R1I0 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6d-4Q5R1I0 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6d-4Q5R1I0 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6d-4Q5R1I0 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6d-4Q5R1I0 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6d-4Q5R1I0 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6d-4Q5R1I0 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Trav6d-4Q5R1I0 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6d-4Q5R1I0 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6d-4Q5R1I0 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC13.44□□□□□ -0.26
Trav6d-4Q5R1I0 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
Trav6d-4Q5R1I0 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6d-4Q5R1I0 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6d-4Q5R1I0 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6d-4Q5R1I0 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC13.44□□□□□ -0.26
Trav6d-4Q5R1I0 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6d-4Q5R1I0 Gm6376-201ENSMUST00000209407 580 ntBASIC13.44□□□□□ -0.26
Trav6d-4Q5R1I0 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC13.44□□□□□ -0.26
Trav6d-4Q5R1I0 Rbfox2-207ENSMUST00000227533 1041 ntBASIC13.44□□□□□ -0.26
Trav6d-4Q5R1I0 Mzt1-203ENSMUST00000227948 952 ntBASIC13.44□□□□□ -0.26
Trav6d-4Q5R1I0 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6d-4Q5R1I0 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6d-4Q5R1I0 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6d-4Q5R1I0 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6d-4Q5R1I0 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6d-4Q5R1I0 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC13.44□□□□□ -0.26
Trav6d-4Q5R1I0 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav6d-4Q5R1I0 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav6d-4Q5R1I0 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav6d-4Q5R1I0 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav6d-4Q5R1I0 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav6d-4Q5R1I0 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Trav6d-4Q5R1I0 Gm12497-201ENSMUST00000138778 237 ntBASIC13.43□□□□□ -0.26
Trav6d-4Q5R1I0 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC13.43□□□□□ -0.26
Trav6d-4Q5R1I0 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC13.43□□□□□ -0.26
Trav6d-4Q5R1I0 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav6d-4Q5R1I0 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav6d-4Q5R1I0 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Trav6d-4Q5R1I0 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav6d-4Q5R1I0 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC13.43□□□□□ -0.26
Trav6d-4Q5R1I0 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav6d-4Q5R1I0 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav6d-4Q5R1I0 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav6d-4Q5R1I0 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC13.43□□□□□ -0.26
Trav6d-4Q5R1I0 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav6d-4Q5R1I0 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav6d-4Q5R1I0 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC13.43□□□□□ -0.26
Trav6d-4Q5R1I0 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav6d-4Q5R1I0 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav6d-4Q5R1I0 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav6d-4Q5R1I0 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav6d-4Q5R1I0 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav6d-4Q5R1I0 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms