Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vps13aQ5H8C4 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vps13aQ5H8C4 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Vps13aQ5H8C4 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vps13aQ5H8C4 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Vps13aQ5H8C4 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Vps13aQ5H8C4 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vps13aQ5H8C4 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vps13aQ5H8C4 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vps13aQ5H8C4 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vps13aQ5H8C4 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC15.83■□□□□ 0.12
Vps13aQ5H8C4 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
Vps13aQ5H8C4 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Vps13aQ5H8C4 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Vps13aQ5H8C4 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps13aQ5H8C4 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps13aQ5H8C4 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps13aQ5H8C4 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Vps13aQ5H8C4 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Vps13aQ5H8C4 Gm12138-201ENSMUST00000122180 951 ntBASIC15.82■□□□□ 0.12
Vps13aQ5H8C4 Gm27618-201ENSMUST00000183671 60 ntBASIC15.82■□□□□ 0.12
Vps13aQ5H8C4 Gm6473-201ENSMUST00000188572 1210 ntBASIC15.82■□□□□ 0.12
Vps13aQ5H8C4 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC15.82■□□□□ 0.12
Vps13aQ5H8C4 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps13aQ5H8C4 Gpr146-202ENSMUST00000053120 1040 ntBASIC15.82■□□□□ 0.12
Vps13aQ5H8C4 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps13aQ5H8C4 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps13aQ5H8C4 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps13aQ5H8C4 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Vps13aQ5H8C4 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Vps13aQ5H8C4 Gm37811-201ENSMUST00000192416 2601 ntBASIC15.82■□□□□ 0.12
Vps13aQ5H8C4 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Vps13aQ5H8C4 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Vps13aQ5H8C4 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps13aQ5H8C4 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps13aQ5H8C4 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps13aQ5H8C4 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vps13aQ5H8C4 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC15.81■□□□□ 0.12
Vps13aQ5H8C4 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Vps13aQ5H8C4 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vps13aQ5H8C4 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Vps13aQ5H8C4 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vps13aQ5H8C4 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vps13aQ5H8C4 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vps13aQ5H8C4 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vps13aQ5H8C4 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Vps13aQ5H8C4 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Vps13aQ5H8C4 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Vps13aQ5H8C4 Rbfox2-208ENSMUST00000227930 1218 ntBASIC15.81■□□□□ 0.12
Vps13aQ5H8C4 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vps13aQ5H8C4 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vps13aQ5H8C4 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Vps13aQ5H8C4 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Vps13aQ5H8C4 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vps13aQ5H8C4 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Vps13aQ5H8C4 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vps13aQ5H8C4 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Vps13aQ5H8C4 Gm14928-201ENSMUST00000120198 477 ntBASIC15.81■□□□□ 0.12
Vps13aQ5H8C4 Mir7085-201ENSMUST00000184353 66 ntBASIC15.81■□□□□ 0.12
Vps13aQ5H8C4 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC15.81■□□□□ 0.12
Vps13aQ5H8C4 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Vps13aQ5H8C4 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Vps13aQ5H8C4 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps13aQ5H8C4 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Vps13aQ5H8C4 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Vps13aQ5H8C4 Gm10253-201ENSMUST00000194270 940 ntBASIC15.8■□□□□ 0.12
Vps13aQ5H8C4 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC15.8■□□□□ 0.12
Vps13aQ5H8C4 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Vps13aQ5H8C4 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps13aQ5H8C4 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Vps13aQ5H8C4 Gm25287-201ENSMUST00000103846 110 ntBASIC15.8■□□□□ 0.12
Vps13aQ5H8C4 Gm22918-201ENSMUST00000103855 110 ntBASIC15.8■□□□□ 0.12
Vps13aQ5H8C4 Rpph1-201ENSMUST00000175096 319 ntBASIC15.8■□□□□ 0.12
Vps13aQ5H8C4 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Vps13aQ5H8C4 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps13aQ5H8C4 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps13aQ5H8C4 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps13aQ5H8C4 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Vps13aQ5H8C4 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vps13aQ5H8C4 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vps13aQ5H8C4 Gm13453-201ENSMUST00000118708 357 ntBASIC15.79■□□□□ 0.12
Vps13aQ5H8C4 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Vps13aQ5H8C4 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vps13aQ5H8C4 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vps13aQ5H8C4 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Vps13aQ5H8C4 Gm38294-201ENSMUST00000192831 381 ntBASIC15.79■□□□□ 0.12
Vps13aQ5H8C4 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC15.79■□□□□ 0.12
Vps13aQ5H8C4 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC15.79■□□□□ 0.12
Vps13aQ5H8C4 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vps13aQ5H8C4 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Vps13aQ5H8C4 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vps13aQ5H8C4 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vps13aQ5H8C4 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC15.79■□□□□ 0.12
Vps13aQ5H8C4 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC15.79■□□□□ 0.12
Vps13aQ5H8C4 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Vps13aQ5H8C4 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Vps13aQ5H8C4 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Vps13aQ5H8C4 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Vps13aQ5H8C4 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vps13aQ5H8C4 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms