Protein–RNA interactions for Protein: Q4U2R1

Herc2, E3 ubiquitin-protein ligase HERC2, mousemouse

Predictions only

Length 4,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc2Q4U2R1 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
Herc2Q4U2R1 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Herc2Q4U2R1 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC9.48□□□□□ -0.89
Herc2Q4U2R1 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Herc2Q4U2R1 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Herc2Q4U2R1 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Herc2Q4U2R1 Gm3695-201ENSMUST00000087222 1009 ntBASIC9.48□□□□□ -0.89
Herc2Q4U2R1 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC9.48□□□□□ -0.89
Herc2Q4U2R1 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Herc2Q4U2R1 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Herc2Q4U2R1 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Herc2Q4U2R1 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Herc2Q4U2R1 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Herc2Q4U2R1 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
Herc2Q4U2R1 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC9.47□□□□□ -0.89
Herc2Q4U2R1 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Herc2Q4U2R1 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC9.47□□□□□ -0.89
Herc2Q4U2R1 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Herc2Q4U2R1 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Herc2Q4U2R1 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
Herc2Q4U2R1 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Herc2Q4U2R1 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Herc2Q4U2R1 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Herc2Q4U2R1 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Herc2Q4U2R1 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Herc2Q4U2R1 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Herc2Q4U2R1 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Herc2Q4U2R1 AC238811.1-201ENSMUST00000225302 441 ntBASIC9.47□□□□□ -0.89
Herc2Q4U2R1 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Herc2Q4U2R1 Gm10478-201ENSMUST00000084451 396 ntBASIC9.47□□□□□ -0.89
Herc2Q4U2R1 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Herc2Q4U2R1 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
Herc2Q4U2R1 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC9.47□□□□□ -0.89
Herc2Q4U2R1 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Herc2Q4U2R1 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Herc2Q4U2R1 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Herc2Q4U2R1 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Herc2Q4U2R1 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Herc2Q4U2R1 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Herc2Q4U2R1 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Herc2Q4U2R1 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Herc2Q4U2R1 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Herc2Q4U2R1 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC9.47□□□□□ -0.89
Herc2Q4U2R1 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Herc2Q4U2R1 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Herc2Q4U2R1 Gm12008-201ENSMUST00000117791 755 ntBASIC9.47□□□□□ -0.89
Herc2Q4U2R1 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Herc2Q4U2R1 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Herc2Q4U2R1 Gm13410-201ENSMUST00000117058 1415 ntBASIC9.46□□□□□ -0.89
Herc2Q4U2R1 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.89
Herc2Q4U2R1 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Herc2Q4U2R1 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Herc2Q4U2R1 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC9.46□□□□□ -0.89
Herc2Q4U2R1 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Herc2Q4U2R1 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC9.46□□□□□ -0.89
Herc2Q4U2R1 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Herc2Q4U2R1 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Herc2Q4U2R1 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Herc2Q4U2R1 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Herc2Q4U2R1 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC9.46□□□□□ -0.89
Herc2Q4U2R1 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Herc2Q4U2R1 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Herc2Q4U2R1 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Herc2Q4U2R1 Gm8344-201ENSMUST00000119813 856 ntBASIC9.46□□□□□ -0.9
Herc2Q4U2R1 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Herc2Q4U2R1 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC9.46□□□□□ -0.9
Herc2Q4U2R1 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC9.46□□□□□ -0.9
Herc2Q4U2R1 Gm43703-201ENSMUST00000200523 763 ntBASIC9.46□□□□□ -0.9
Herc2Q4U2R1 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC9.46□□□□□ -0.9
Herc2Q4U2R1 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Herc2Q4U2R1 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC9.46□□□□□ -0.9
Herc2Q4U2R1 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Herc2Q4U2R1 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Herc2Q4U2R1 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Herc2Q4U2R1 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Herc2Q4U2R1 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Herc2Q4U2R1 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Herc2Q4U2R1 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Herc2Q4U2R1 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC9.46□□□□□ -0.9
Herc2Q4U2R1 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
Herc2Q4U2R1 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Herc2Q4U2R1 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Herc2Q4U2R1 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Herc2Q4U2R1 Gm44974-201ENSMUST00000206387 1279 ntBASIC9.45□□□□□ -0.9
Herc2Q4U2R1 AC159896.2-201ENSMUST00000214753 269 ntBASIC9.45□□□□□ -0.9
Herc2Q4U2R1 AC154319.1-201ENSMUST00000216330 312 ntBASIC9.45□□□□□ -0.9
Herc2Q4U2R1 AL589735.1-201ENSMUST00000224353 270 ntBASIC9.45□□□□□ -0.9
Herc2Q4U2R1 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Herc2Q4U2R1 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Herc2Q4U2R1 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Herc2Q4U2R1 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Herc2Q4U2R1 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Herc2Q4U2R1 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC9.45□□□□□ -0.9
Herc2Q4U2R1 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC9.45□□□□□ -0.9
Herc2Q4U2R1 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Herc2Q4U2R1 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Herc2Q4U2R1 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Herc2Q4U2R1 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Herc2Q4U2R1 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Herc2Q4U2R1 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC9.45□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms