Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Shisa3Q3UPR0 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Shisa3Q3UPR0 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Shisa3Q3UPR0 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Shisa3Q3UPR0 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Shisa3Q3UPR0 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Shisa3Q3UPR0 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Shisa3Q3UPR0 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Shisa3Q3UPR0 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Shisa3Q3UPR0 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Shisa3Q3UPR0 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Shisa3Q3UPR0 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Shisa3Q3UPR0 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC13.88□□□□□ -0.19
Shisa3Q3UPR0 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Shisa3Q3UPR0 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Shisa3Q3UPR0 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Shisa3Q3UPR0 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Shisa3Q3UPR0 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Shisa3Q3UPR0 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Shisa3Q3UPR0 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Shisa3Q3UPR0 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Shisa3Q3UPR0 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Shisa3Q3UPR0 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Shisa3Q3UPR0 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC13.87□□□□□ -0.19
Shisa3Q3UPR0 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Shisa3Q3UPR0 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Shisa3Q3UPR0 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Shisa3Q3UPR0 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Shisa3Q3UPR0 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Shisa3Q3UPR0 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Shisa3Q3UPR0 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Shisa3Q3UPR0 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Shisa3Q3UPR0 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Shisa3Q3UPR0 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Shisa3Q3UPR0 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Shisa3Q3UPR0 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Shisa3Q3UPR0 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Shisa3Q3UPR0 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Shisa3Q3UPR0 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Shisa3Q3UPR0 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC13.87□□□□□ -0.19
Shisa3Q3UPR0 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Shisa3Q3UPR0 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Shisa3Q3UPR0 Gm45133-201ENSMUST00000207548 2773 ntBASIC13.87□□□□□ -0.19
Shisa3Q3UPR0 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Shisa3Q3UPR0 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Shisa3Q3UPR0 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Shisa3Q3UPR0 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Shisa3Q3UPR0 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC13.87□□□□□ -0.19
Shisa3Q3UPR0 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Shisa3Q3UPR0 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Shisa3Q3UPR0 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Shisa3Q3UPR0 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Shisa3Q3UPR0 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Shisa3Q3UPR0 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Shisa3Q3UPR0 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Shisa3Q3UPR0 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Shisa3Q3UPR0 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Shisa3Q3UPR0 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Shisa3Q3UPR0 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC13.86□□□□□ -0.19
Shisa3Q3UPR0 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Shisa3Q3UPR0 Gm14464-201ENSMUST00000119658 1254 ntBASIC13.86□□□□□ -0.19
Shisa3Q3UPR0 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC13.86□□□□□ -0.19
Shisa3Q3UPR0 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Shisa3Q3UPR0 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Shisa3Q3UPR0 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Shisa3Q3UPR0 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Shisa3Q3UPR0 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Shisa3Q3UPR0 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Shisa3Q3UPR0 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Shisa3Q3UPR0 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Shisa3Q3UPR0 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Shisa3Q3UPR0 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Shisa3Q3UPR0 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Shisa3Q3UPR0 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Shisa3Q3UPR0 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Shisa3Q3UPR0 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Shisa3Q3UPR0 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Shisa3Q3UPR0 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Shisa3Q3UPR0 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC13.85□□□□□ -0.19
Shisa3Q3UPR0 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Shisa3Q3UPR0 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC13.85□□□□□ -0.19
Shisa3Q3UPR0 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
Shisa3Q3UPR0 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Shisa3Q3UPR0 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC13.85□□□□□ -0.19
Shisa3Q3UPR0 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Shisa3Q3UPR0 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Shisa3Q3UPR0 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Shisa3Q3UPR0 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Shisa3Q3UPR0 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Shisa3Q3UPR0 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Shisa3Q3UPR0 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC13.85□□□□□ -0.19
Shisa3Q3UPR0 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Shisa3Q3UPR0 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Shisa3Q3UPR0 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
Shisa3Q3UPR0 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Shisa3Q3UPR0 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC13.85□□□□□ -0.19
Shisa3Q3UPR0 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Shisa3Q3UPR0 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Shisa3Q3UPR0 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Shisa3Q3UPR0 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms