Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ptchd3Q0EEE2 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ptchd3Q0EEE2 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Ptchd3Q0EEE2 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ptchd3Q0EEE2 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ptchd3Q0EEE2 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ptchd3Q0EEE2 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ptchd3Q0EEE2 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ptchd3Q0EEE2 Gm42473-201ENSMUST00000201056 2291 ntBASIC15.54■□□□□ 0.08
Ptchd3Q0EEE2 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC15.54■□□□□ 0.08
Ptchd3Q0EEE2 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ptchd3Q0EEE2 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ptchd3Q0EEE2 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ptchd3Q0EEE2 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ptchd3Q0EEE2 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ptchd3Q0EEE2 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ptchd3Q0EEE2 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ptchd3Q0EEE2 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Ptchd3Q0EEE2 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ptchd3Q0EEE2 Gm18958-201ENSMUST00000174258 762 ntBASIC15.54■□□□□ 0.08
Ptchd3Q0EEE2 Gm27463-201ENSMUST00000183569 57 ntBASIC15.54■□□□□ 0.08
Ptchd3Q0EEE2 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC15.54■□□□□ 0.08
Ptchd3Q0EEE2 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ptchd3Q0EEE2 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
Ptchd3Q0EEE2 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ptchd3Q0EEE2 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ptchd3Q0EEE2 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ptchd3Q0EEE2 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ptchd3Q0EEE2 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ptchd3Q0EEE2 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ptchd3Q0EEE2 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC15.54■□□□□ 0.08
Ptchd3Q0EEE2 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ptchd3Q0EEE2 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ptchd3Q0EEE2 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ptchd3Q0EEE2 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ptchd3Q0EEE2 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ptchd3Q0EEE2 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC15.53■□□□□ 0.08
Ptchd3Q0EEE2 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ptchd3Q0EEE2 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ptchd3Q0EEE2 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ptchd3Q0EEE2 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
Ptchd3Q0EEE2 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC15.53■□□□□ 0.08
Ptchd3Q0EEE2 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ptchd3Q0EEE2 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC15.53■□□□□ 0.08
Ptchd3Q0EEE2 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ptchd3Q0EEE2 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC15.53■□□□□ 0.08
Ptchd3Q0EEE2 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ptchd3Q0EEE2 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ptchd3Q0EEE2 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ptchd3Q0EEE2 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ptchd3Q0EEE2 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Ptchd3Q0EEE2 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ptchd3Q0EEE2 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ptchd3Q0EEE2 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ptchd3Q0EEE2 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC15.53■□□□□ 0.08
Ptchd3Q0EEE2 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Ptchd3Q0EEE2 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ptchd3Q0EEE2 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ptchd3Q0EEE2 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ptchd3Q0EEE2 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC15.52■□□□□ 0.08
Ptchd3Q0EEE2 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ptchd3Q0EEE2 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Ptchd3Q0EEE2 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ptchd3Q0EEE2 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ptchd3Q0EEE2 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ptchd3Q0EEE2 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ptchd3Q0EEE2 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ptchd3Q0EEE2 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC15.52■□□□□ 0.08
Ptchd3Q0EEE2 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
Ptchd3Q0EEE2 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC15.52■□□□□ 0.08
Ptchd3Q0EEE2 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC15.52■□□□□ 0.08
Ptchd3Q0EEE2 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC15.52■□□□□ 0.08
Ptchd3Q0EEE2 Gm10252-201ENSMUST00000209541 832 ntBASIC15.52■□□□□ 0.08
Ptchd3Q0EEE2 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ptchd3Q0EEE2 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ptchd3Q0EEE2 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Ptchd3Q0EEE2 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Ptchd3Q0EEE2 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ptchd3Q0EEE2 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Ptchd3Q0EEE2 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Ptchd3Q0EEE2 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ptchd3Q0EEE2 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ptchd3Q0EEE2 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ptchd3Q0EEE2 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Ptchd3Q0EEE2 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ptchd3Q0EEE2 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC15.51■□□□□ 0.07
Ptchd3Q0EEE2 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ptchd3Q0EEE2 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ptchd3Q0EEE2 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ptchd3Q0EEE2 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ptchd3Q0EEE2 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ptchd3Q0EEE2 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ptchd3Q0EEE2 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC15.51■□□□□ 0.07
Ptchd3Q0EEE2 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Ptchd3Q0EEE2 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ptchd3Q0EEE2 Gm4217-201ENSMUST00000182243 1002 ntBASIC15.51■□□□□ 0.07
Ptchd3Q0EEE2 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ptchd3Q0EEE2 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC15.51■□□□□ 0.07
Ptchd3Q0EEE2 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC15.51■□□□□ 0.07
Ptchd3Q0EEE2 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms