Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx3-1P97436 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC13.85□□□□□ -0.19
Nkx3-1P97436 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx3-1P97436 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Nkx3-1P97436 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Nkx3-1P97436 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx3-1P97436 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx3-1P97436 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC13.85□□□□□ -0.19
Nkx3-1P97436 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Nkx3-1P97436 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC13.85□□□□□ -0.19
Nkx3-1P97436 AC154222.1-201ENSMUST00000223882 475 ntBASIC13.85□□□□□ -0.19
Nkx3-1P97436 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx3-1P97436 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx3-1P97436 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx3-1P97436 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Nkx3-1P97436 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC13.85□□□□□ -0.19
Nkx3-1P97436 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx3-1P97436 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx3-1P97436 Gm5837-201ENSMUST00000191844 1369 ntBASIC13.84□□□□□ -0.19
Nkx3-1P97436 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx3-1P97436 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx3-1P97436 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx3-1P97436 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx3-1P97436 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx3-1P97436 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
Nkx3-1P97436 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx3-1P97436 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC13.84□□□□□ -0.19
Nkx3-1P97436 Gm12260-201ENSMUST00000122447 411 ntBASIC13.84□□□□□ -0.19
Nkx3-1P97436 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC13.84□□□□□ -0.19
Nkx3-1P97436 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx3-1P97436 Gm25406-201ENSMUST00000157599 105 ntBASIC13.84□□□□□ -0.19
Nkx3-1P97436 Gm42670-201ENSMUST00000201816 1292 ntBASIC13.84□□□□□ -0.19
Nkx3-1P97436 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC13.84□□□□□ -0.19
Nkx3-1P97436 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx3-1P97436 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx3-1P97436 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC13.84□□□□□ -0.19
Nkx3-1P97436 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx3-1P97436 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx3-1P97436 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx3-1P97436 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx3-1P97436 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Nkx3-1P97436 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Nkx3-1P97436 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Nkx3-1P97436 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
Nkx3-1P97436 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Nkx3-1P97436 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
Nkx3-1P97436 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx3-1P97436 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx3-1P97436 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx3-1P97436 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx3-1P97436 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx3-1P97436 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC13.83□□□□□ -0.2
Nkx3-1P97436 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx3-1P97436 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx3-1P97436 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx3-1P97436 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC13.83□□□□□ -0.2
Nkx3-1P97436 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC13.83□□□□□ -0.2
Nkx3-1P97436 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Nkx3-1P97436 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx3-1P97436 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx3-1P97436 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx3-1P97436 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx3-1P97436 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx3-1P97436 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC13.82□□□□□ -0.2
Nkx3-1P97436 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx3-1P97436 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx3-1P97436 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Nkx3-1P97436 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Nkx3-1P97436 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx3-1P97436 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx3-1P97436 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx3-1P97436 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx3-1P97436 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx3-1P97436 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC13.82□□□□□ -0.2
Nkx3-1P97436 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx3-1P97436 Gm13036-201ENSMUST00000117799 748 ntBASIC13.82□□□□□ -0.2
Nkx3-1P97436 Gm6184-201ENSMUST00000120403 1261 ntBASIC13.82□□□□□ -0.2
Nkx3-1P97436 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Nkx3-1P97436 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Nkx3-1P97436 Gm43935-201ENSMUST00000203569 1050 ntBASIC13.82□□□□□ -0.2
Nkx3-1P97436 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx3-1P97436 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Nkx3-1P97436 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Nkx3-1P97436 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx3-1P97436 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx3-1P97436 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx3-1P97436 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx3-1P97436 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx3-1P97436 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx3-1P97436 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx3-1P97436 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx3-1P97436 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx3-1P97436 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC13.81□□□□□ -0.2
Nkx3-1P97436 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx3-1P97436 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx3-1P97436 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx3-1P97436 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Nkx3-1P97436 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx3-1P97436 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx3-1P97436 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms