Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SgcbP82349 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
SgcbP82349 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SgcbP82349 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC14.3□□□□□ -0.12
SgcbP82349 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
SgcbP82349 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SgcbP82349 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SgcbP82349 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SgcbP82349 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
SgcbP82349 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SgcbP82349 Gm37444-201ENSMUST00000193605 439 ntBASIC14.3□□□□□ -0.12
SgcbP82349 Gm44454-201ENSMUST00000198541 138 ntBASIC14.3□□□□□ -0.12
SgcbP82349 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SgcbP82349 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
SgcbP82349 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC14.3□□□□□ -0.12
SgcbP82349 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SgcbP82349 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SgcbP82349 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SgcbP82349 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SgcbP82349 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SgcbP82349 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SgcbP82349 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SgcbP82349 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SgcbP82349 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
SgcbP82349 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SgcbP82349 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SgcbP82349 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
SgcbP82349 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
SgcbP82349 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SgcbP82349 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SgcbP82349 Gm7935-201ENSMUST00000100555 1278 ntBASIC14.29□□□□□ -0.12
SgcbP82349 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC14.29□□□□□ -0.12
SgcbP82349 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC14.29□□□□□ -0.12
SgcbP82349 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC14.29□□□□□ -0.12
SgcbP82349 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SgcbP82349 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SgcbP82349 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SgcbP82349 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
SgcbP82349 Spr-ps1-201ENSMUST00000089584 605 ntBASIC14.29□□□□□ -0.12
SgcbP82349 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SgcbP82349 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SgcbP82349 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
SgcbP82349 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
SgcbP82349 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SgcbP82349 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SgcbP82349 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SgcbP82349 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SgcbP82349 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SgcbP82349 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SgcbP82349 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SgcbP82349 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SgcbP82349 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC14.28□□□□□ -0.12
SgcbP82349 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SgcbP82349 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
SgcbP82349 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SgcbP82349 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SgcbP82349 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.28□□□□□ -0.12
SgcbP82349 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SgcbP82349 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SgcbP82349 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SgcbP82349 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SgcbP82349 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SgcbP82349 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SgcbP82349 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SgcbP82349 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
SgcbP82349 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SgcbP82349 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SgcbP82349 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SgcbP82349 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SgcbP82349 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SgcbP82349 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
SgcbP82349 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
SgcbP82349 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SgcbP82349 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC14.27□□□□□ -0.12
SgcbP82349 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC14.27□□□□□ -0.12
SgcbP82349 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SgcbP82349 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.12
SgcbP82349 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SgcbP82349 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SgcbP82349 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SgcbP82349 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SgcbP82349 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SgcbP82349 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC14.27□□□□□ -0.13
SgcbP82349 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
SgcbP82349 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC14.27□□□□□ -0.13
SgcbP82349 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SgcbP82349 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SgcbP82349 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SgcbP82349 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
SgcbP82349 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SgcbP82349 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SgcbP82349 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SgcbP82349 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
SgcbP82349 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SgcbP82349 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
SgcbP82349 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SgcbP82349 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SgcbP82349 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SgcbP82349 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SgcbP82349 Gm26596-201ENSMUST00000180464 2655 ntBASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 70.2 ms