Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CiitaP79621 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CiitaP79621 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CiitaP79621 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
CiitaP79621 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CiitaP79621 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
CiitaP79621 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CiitaP79621 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CiitaP79621 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CiitaP79621 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CiitaP79621 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CiitaP79621 Gm4609-201ENSMUST00000106443 1002 ntBASIC17.34■□□□□ 0.37
CiitaP79621 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CiitaP79621 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CiitaP79621 Gm5138-201ENSMUST00000113842 1002 ntBASIC17.34■□□□□ 0.37
CiitaP79621 Gm15191-201ENSMUST00000117933 1000 ntBASIC17.34■□□□□ 0.37
CiitaP79621 Gm12182-201ENSMUST00000118655 1008 ntBASIC17.34■□□□□ 0.37
CiitaP79621 Gm13882-201ENSMUST00000120886 1002 ntBASIC17.34■□□□□ 0.37
CiitaP79621 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CiitaP79621 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
CiitaP79621 Gm10284-201ENSMUST00000145057 1005 ntBASIC17.34■□□□□ 0.37
CiitaP79621 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CiitaP79621 Gm7230-201ENSMUST00000173026 815 ntBASIC17.34■□□□□ 0.37
CiitaP79621 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CiitaP79621 Gm10481-201ENSMUST00000179228 1002 ntBASIC17.34■□□□□ 0.37
CiitaP79621 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC17.34■□□□□ 0.37
CiitaP79621 Gm2574-201ENSMUST00000181051 1002 ntBASIC17.34■□□□□ 0.37
CiitaP79621 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC17.34■□□□□ 0.37
CiitaP79621 Gm3200-201ENSMUST00000181493 1002 ntBASIC17.34■□□□□ 0.37
CiitaP79621 Gm8825-201ENSMUST00000182565 998 ntBASIC17.34■□□□□ 0.37
CiitaP79621 Gm4518-201ENSMUST00000182638 718 ntBASIC17.34■□□□□ 0.37
CiitaP79621 Gm8330-201ENSMUST00000182754 1008 ntBASIC17.34■□□□□ 0.37
CiitaP79621 Gm4575-201ENSMUST00000182991 1002 ntBASIC17.34■□□□□ 0.37
CiitaP79621 Gm8709-201ENSMUST00000183230 1012 ntBASIC17.34■□□□□ 0.37
CiitaP79621 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC17.34■□□□□ 0.37
CiitaP79621 Gm6089-201ENSMUST00000197666 938 ntBASIC17.34■□□□□ 0.37
CiitaP79621 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CiitaP79621 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC17.34■□□□□ 0.37
CiitaP79621 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CiitaP79621 Gm18622-201ENSMUST00000219361 595 ntBASIC17.34■□□□□ 0.37
CiitaP79621 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CiitaP79621 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CiitaP79621 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CiitaP79621 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CiitaP79621 Gm10293-201ENSMUST00000076317 1002 ntBASIC17.34■□□□□ 0.37
CiitaP79621 Gm6316-201ENSMUST00000082064 1020 ntBASIC17.34■□□□□ 0.37
CiitaP79621 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CiitaP79621 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CiitaP79621 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CiitaP79621 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
CiitaP79621 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CiitaP79621 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
CiitaP79621 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CiitaP79621 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CiitaP79621 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
CiitaP79621 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CiitaP79621 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CiitaP79621 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC17.33■□□□□ 0.37
CiitaP79621 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CiitaP79621 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CiitaP79621 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CiitaP79621 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CiitaP79621 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CiitaP79621 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC17.33■□□□□ 0.36
CiitaP79621 Gm2651-201ENSMUST00000203560 838 ntBASIC17.33■□□□□ 0.36
CiitaP79621 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CiitaP79621 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CiitaP79621 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CiitaP79621 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CiitaP79621 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CiitaP79621 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CiitaP79621 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CiitaP79621 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CiitaP79621 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC17.33■□□□□ 0.36
CiitaP79621 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC17.33■□□□□ 0.36
CiitaP79621 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CiitaP79621 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CiitaP79621 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CiitaP79621 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CiitaP79621 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CiitaP79621 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CiitaP79621 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CiitaP79621 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CiitaP79621 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
CiitaP79621 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC17.32■□□□□ 0.36
CiitaP79621 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CiitaP79621 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC17.32■□□□□ 0.36
CiitaP79621 Mir5131-201ENSMUST00000175426 93 ntBASIC17.32■□□□□ 0.36
CiitaP79621 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CiitaP79621 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC17.32■□□□□ 0.36
CiitaP79621 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CiitaP79621 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC17.32■□□□□ 0.36
CiitaP79621 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
CiitaP79621 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CiitaP79621 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
CiitaP79621 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CiitaP79621 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CiitaP79621 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CiitaP79621 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
CiitaP79621 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms