Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cks1bP61025 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Cks1bP61025 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC11.48□□□□□ -0.57
Cks1bP61025 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Cks1bP61025 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Cks1bP61025 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cks1bP61025 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cks1bP61025 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cks1bP61025 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cks1bP61025 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cks1bP61025 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cks1bP61025 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cks1bP61025 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cks1bP61025 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cks1bP61025 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cks1bP61025 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cks1bP61025 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cks1bP61025 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cks1bP61025 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cks1bP61025 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cks1bP61025 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cks1bP61025 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Cks1bP61025 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cks1bP61025 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cks1bP61025 Gm19721-201ENSMUST00000195284 1764 ntBASIC11.47□□□□□ -0.57
Cks1bP61025 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cks1bP61025 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Cks1bP61025 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cks1bP61025 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cks1bP61025 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC11.47□□□□□ -0.57
Cks1bP61025 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC11.47□□□□□ -0.57
Cks1bP61025 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC11.47□□□□□ -0.57
Cks1bP61025 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cks1bP61025 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
Cks1bP61025 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Cks1bP61025 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Cks1bP61025 Mir6349-201ENSMUST00000184059 97 ntBASIC11.47□□□□□ -0.57
Cks1bP61025 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cks1bP61025 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cks1bP61025 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cks1bP61025 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cks1bP61025 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC11.47□□□□□ -0.57
Cks1bP61025 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cks1bP61025 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Cks1bP61025 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cks1bP61025 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Cks1bP61025 Gm37305-201ENSMUST00000195714 4279 ntBASIC11.46□□□□□ -0.57
Cks1bP61025 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cks1bP61025 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cks1bP61025 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cks1bP61025 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Cks1bP61025 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cks1bP61025 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Cks1bP61025 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cks1bP61025 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cks1bP61025 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Cks1bP61025 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC11.46□□□□□ -0.57
Cks1bP61025 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cks1bP61025 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cks1bP61025 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
Cks1bP61025 Gm11927-201ENSMUST00000118472 759 ntBASIC11.46□□□□□ -0.57
Cks1bP61025 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Cks1bP61025 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cks1bP61025 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Cks1bP61025 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC11.46□□□□□ -0.57
Cks1bP61025 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC11.46□□□□□ -0.57
Cks1bP61025 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cks1bP61025 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cks1bP61025 Gm21451-201ENSMUST00000111062 2775 ntBASIC11.46□□□□□ -0.58
Cks1bP61025 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cks1bP61025 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC11.46□□□□□ -0.58
Cks1bP61025 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cks1bP61025 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cks1bP61025 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC11.46□□□□□ -0.58
Cks1bP61025 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cks1bP61025 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cks1bP61025 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cks1bP61025 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cks1bP61025 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cks1bP61025 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC11.45□□□□□ -0.58
Cks1bP61025 Gm11841-201ENSMUST00000117060 1963 ntBASIC11.45□□□□□ -0.58
Cks1bP61025 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cks1bP61025 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Cks1bP61025 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cks1bP61025 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC11.45□□□□□ -0.58
Cks1bP61025 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cks1bP61025 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cks1bP61025 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC11.45□□□□□ -0.58
Cks1bP61025 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC11.45□□□□□ -0.58
Cks1bP61025 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cks1bP61025 Gm42569-201ENSMUST00000200539 472 ntBASIC11.45□□□□□ -0.58
Cks1bP61025 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC11.45□□□□□ -0.58
Cks1bP61025 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Cks1bP61025 Rab3c-203ENSMUST00000224180 967 ntBASIC11.45□□□□□ -0.58
Cks1bP61025 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cks1bP61025 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cks1bP61025 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cks1bP61025 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cks1bP61025 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cks1bP61025 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 11.7 ms