Protein–RNA interactions for Protein: P60897

Sem1, 26S proteasome complex subunit SEM1, mousemouse

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sem1P60897 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sem1P60897 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Sem1P60897 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sem1P60897 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sem1P60897 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Sem1P60897 Gm29791-202ENSMUST00000207888 369 ntBASIC15.21■□□□□ 0.03
Sem1P60897 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC15.21■□□□□ 0.03
Sem1P60897 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sem1P60897 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC15.21■□□□□ 0.03
Sem1P60897 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sem1P60897 Gm9947-201ENSMUST00000067599 2920 ntBASIC15.21■□□□□ 0.03
Sem1P60897 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sem1P60897 Mypopos-202ENSMUST00000205975 2321 ntBASIC15.21■□□□□ 0.02
Sem1P60897 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Sem1P60897 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Sem1P60897 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Sem1P60897 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Sem1P60897 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Sem1P60897 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Sem1P60897 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Sem1P60897 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sem1P60897 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sem1P60897 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sem1P60897 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Sem1P60897 AC148324.1-201ENSMUST00000219034 4240 ntBASIC15.2■□□□□ 0.02
Sem1P60897 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sem1P60897 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sem1P60897 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Sem1P60897 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sem1P60897 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Sem1P60897 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sem1P60897 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sem1P60897 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sem1P60897 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Sem1P60897 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sem1P60897 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Sem1P60897 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
Sem1P60897 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sem1P60897 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sem1P60897 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Sem1P60897 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Sem1P60897 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sem1P60897 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sem1P60897 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Sem1P60897 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sem1P60897 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sem1P60897 Gm12620-201ENSMUST00000119791 1986 ntBASIC15.19■□□□□ 0.02
Sem1P60897 Gm12612-201ENSMUST00000140182 1986 ntBASIC15.19■□□□□ 0.02
Sem1P60897 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC15.19■□□□□ 0.02
Sem1P60897 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sem1P60897 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sem1P60897 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Sem1P60897 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sem1P60897 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Sem1P60897 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sem1P60897 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Sem1P60897 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Sem1P60897 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sem1P60897 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Sem1P60897 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sem1P60897 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sem1P60897 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sem1P60897 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Sem1P60897 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sem1P60897 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sem1P60897 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Sem1P60897 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sem1P60897 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sem1P60897 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
Sem1P60897 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Sem1P60897 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Sem1P60897 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Sem1P60897 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Sem1P60897 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sem1P60897 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sem1P60897 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sem1P60897 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sem1P60897 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC15.18■□□□□ 0.02
Sem1P60897 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC15.18■□□□□ 0.02
Sem1P60897 AC107711.5-202ENSMUST00000226429 702 ntBASIC15.18■□□□□ 0.02
Sem1P60897 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sem1P60897 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sem1P60897 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sem1P60897 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Sem1P60897 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Sem1P60897 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sem1P60897 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sem1P60897 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sem1P60897 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sem1P60897 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sem1P60897 Rubie-203ENSMUST00000227803 2430 ntBASIC15.17■□□□□ 0.02
Sem1P60897 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sem1P60897 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC15.17■□□□□ 0.02
Sem1P60897 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Sem1P60897 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sem1P60897 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Sem1P60897 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sem1P60897 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC15.17■□□□□ 0.02
Sem1P60897 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC15.17■□□□□ 0.02
Sem1P60897 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms