Protein–RNA interactions for Protein: P56942

Pmch, Pro-MCH, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PmchP56942 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
PmchP56942 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
PmchP56942 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
PmchP56942 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
PmchP56942 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PmchP56942 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
PmchP56942 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PmchP56942 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
PmchP56942 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
PmchP56942 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PmchP56942 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
PmchP56942 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PmchP56942 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PmchP56942 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PmchP56942 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PmchP56942 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PmchP56942 Gm27000-201ENSMUST00000182943 842 ntBASIC13.16□□□□□ -0.3
PmchP56942 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PmchP56942 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC13.16□□□□□ -0.3
PmchP56942 Gm20049-201ENSMUST00000219950 730 ntBASIC13.16□□□□□ -0.3
PmchP56942 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PmchP56942 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PmchP56942 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PmchP56942 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC13.16□□□□□ -0.3
PmchP56942 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
PmchP56942 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
PmchP56942 Gm37812-201ENSMUST00000195216 2475 ntBASIC13.16□□□□□ -0.3
PmchP56942 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
PmchP56942 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
PmchP56942 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
PmchP56942 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
PmchP56942 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
PmchP56942 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
PmchP56942 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
PmchP56942 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PmchP56942 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PmchP56942 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
PmchP56942 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC13.15□□□□□ -0.3
PmchP56942 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
PmchP56942 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
PmchP56942 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC13.15□□□□□ -0.3
PmchP56942 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
PmchP56942 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
PmchP56942 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PmchP56942 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PmchP56942 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC13.15□□□□□ -0.3
PmchP56942 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PmchP56942 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
PmchP56942 AC164629.5-201ENSMUST00000220387 632 ntBASIC13.15□□□□□ -0.3
PmchP56942 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC13.15□□□□□ -0.3
PmchP56942 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PmchP56942 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PmchP56942 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PmchP56942 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC13.15□□□□□ -0.3
PmchP56942 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PmchP56942 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
PmchP56942 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PmchP56942 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PmchP56942 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.31
PmchP56942 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
PmchP56942 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PmchP56942 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
PmchP56942 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PmchP56942 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
PmchP56942 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PmchP56942 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
PmchP56942 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
PmchP56942 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PmchP56942 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
PmchP56942 Gm45203-201ENSMUST00000206384 1831 ntBASIC13.14□□□□□ -0.31
PmchP56942 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
PmchP56942 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
PmchP56942 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PmchP56942 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC13.14□□□□□ -0.31
PmchP56942 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
PmchP56942 Gm9731-201ENSMUST00000209480 747 ntBASIC13.14□□□□□ -0.31
PmchP56942 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PmchP56942 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PmchP56942 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
PmchP56942 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
PmchP56942 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
PmchP56942 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PmchP56942 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PmchP56942 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PmchP56942 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
PmchP56942 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
PmchP56942 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PmchP56942 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC13.13□□□□□ -0.31
PmchP56942 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
PmchP56942 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PmchP56942 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
PmchP56942 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PmchP56942 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PmchP56942 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
PmchP56942 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
PmchP56942 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
PmchP56942 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PmchP56942 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
PmchP56942 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PmchP56942 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms