Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Gm18115-201ENSMUST00000221209 621 ntBASIC13□□□□□ -0.33
Sssca1P56873 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Sssca1P56873 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC13□□□□□ -0.33
Sssca1P56873 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC13□□□□□ -0.33
Sssca1P56873 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sssca1P56873 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Sssca1P56873 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sssca1P56873 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sssca1P56873 Gm42473-201ENSMUST00000201056 2291 ntBASIC13□□□□□ -0.33
Sssca1P56873 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sssca1P56873 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sssca1P56873 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sssca1P56873 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sssca1P56873 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sssca1P56873 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sssca1P56873 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC12.99□□□□□ -0.33
Sssca1P56873 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC12.99□□□□□ -0.33
Sssca1P56873 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC12.99□□□□□ -0.33
Sssca1P56873 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sssca1P56873 Gm44616-201ENSMUST00000206417 1732 ntBASIC12.99□□□□□ -0.33
Sssca1P56873 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sssca1P56873 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC12.99□□□□□ -0.33
Sssca1P56873 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC12.99□□□□□ -0.33
Sssca1P56873 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
Sssca1P56873 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Sssca1P56873 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sssca1P56873 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sssca1P56873 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sssca1P56873 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC12.99□□□□□ -0.33
Sssca1P56873 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sssca1P56873 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sssca1P56873 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC12.99□□□□□ -0.33
Sssca1P56873 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Sssca1P56873 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Sssca1P56873 AC154649.1-201ENSMUST00000227392 384 ntBASIC12.99□□□□□ -0.33
Sssca1P56873 Odf3b-204ENSMUST00000227834 930 ntBASIC12.99□□□□□ -0.33
Sssca1P56873 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sssca1P56873 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Sssca1P56873 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Sssca1P56873 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
Sssca1P56873 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sssca1P56873 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sssca1P56873 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Sssca1P56873 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sssca1P56873 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC12.99□□□□□ -0.33
Sssca1P56873 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sssca1P56873 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sssca1P56873 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sssca1P56873 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sssca1P56873 Zfp264-201ENSMUST00000208656 1563 ntBASIC12.98□□□□□ -0.33
Sssca1P56873 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Sssca1P56873 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sssca1P56873 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Sssca1P56873 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sssca1P56873 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sssca1P56873 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sssca1P56873 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Sssca1P56873 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sssca1P56873 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Sssca1P56873 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Sssca1P56873 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sssca1P56873 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sssca1P56873 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sssca1P56873 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sssca1P56873 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sssca1P56873 Gm14464-201ENSMUST00000119658 1254 ntBASIC12.98□□□□□ -0.33
Sssca1P56873 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC12.98□□□□□ -0.33
Sssca1P56873 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Sssca1P56873 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sssca1P56873 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sssca1P56873 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sssca1P56873 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Sssca1P56873 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sssca1P56873 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Sssca1P56873 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sssca1P56873 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sssca1P56873 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sssca1P56873 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sssca1P56873 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC12.98□□□□□ -0.33
Sssca1P56873 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sssca1P56873 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Sssca1P56873 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sssca1P56873 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sssca1P56873 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sssca1P56873 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Sssca1P56873 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sssca1P56873 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC12.98□□□□□ -0.33
Sssca1P56873 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC12.98□□□□□ -0.33
Sssca1P56873 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC12.98□□□□□ -0.33
Sssca1P56873 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sssca1P56873 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sssca1P56873 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sssca1P56873 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sssca1P56873 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sssca1P56873 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Sssca1P56873 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sssca1P56873 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Sssca1P56873 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC12.97□□□□□ -0.33
Sssca1P56873 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sssca1P56873 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms