Protein–RNA interactions for Protein: P56857

Cldn18, Claudin-18, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn18P56857 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cldn18P56857 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cldn18P56857 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cldn18P56857 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cldn18P56857 Rbfox2-206ENSMUST00000227314 1810 ntBASIC14.37□□□□□ -0.11
Cldn18P56857 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cldn18P56857 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cldn18P56857 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Cldn18P56857 Gm15165-201ENSMUST00000118140 502 ntBASIC14.37□□□□□ -0.11
Cldn18P56857 Gm27867-201ENSMUST00000184778 125 ntBASIC14.37□□□□□ -0.11
Cldn18P56857 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC14.37□□□□□ -0.11
Cldn18P56857 AC108846.1-201ENSMUST00000214531 513 ntBASIC14.37□□□□□ -0.11
Cldn18P56857 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cldn18P56857 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cldn18P56857 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cldn18P56857 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cldn18P56857 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Cldn18P56857 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cldn18P56857 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cldn18P56857 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn18P56857 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Cldn18P56857 Gm45412-201ENSMUST00000210217 2275 ntBASIC14.36□□□□□ -0.11
Cldn18P56857 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn18P56857 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Cldn18P56857 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn18P56857 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn18P56857 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Cldn18P56857 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn18P56857 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn18P56857 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC14.36□□□□□ -0.11
Cldn18P56857 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn18P56857 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn18P56857 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn18P56857 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Cldn18P56857 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn18P56857 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC14.36□□□□□ -0.11
Cldn18P56857 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn18P56857 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC14.36□□□□□ -0.11
Cldn18P56857 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC14.36□□□□□ -0.11
Cldn18P56857 AC127349.1-201ENSMUST00000224590 266 ntBASIC14.36□□□□□ -0.11
Cldn18P56857 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Cldn18P56857 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn18P56857 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn18P56857 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn18P56857 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn18P56857 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn18P56857 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn18P56857 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Cldn18P56857 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn18P56857 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn18P56857 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Cldn18P56857 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn18P56857 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Cldn18P56857 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC14.35□□□□□ -0.11
Cldn18P56857 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn18P56857 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn18P56857 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn18P56857 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Cldn18P56857 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn18P56857 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
Cldn18P56857 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC14.35□□□□□ -0.11
Cldn18P56857 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn18P56857 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn18P56857 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Cldn18P56857 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn18P56857 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn18P56857 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn18P56857 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn18P56857 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn18P56857 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn18P56857 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn18P56857 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC14.34□□□□□ -0.11
Cldn18P56857 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn18P56857 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn18P56857 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Cldn18P56857 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC14.34□□□□□ -0.11
Cldn18P56857 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn18P56857 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn18P56857 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn18P56857 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn18P56857 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn18P56857 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn18P56857 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC14.34□□□□□ -0.11
Cldn18P56857 Gm7935-201ENSMUST00000100555 1278 ntBASIC14.34□□□□□ -0.11
Cldn18P56857 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
Cldn18P56857 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC14.34□□□□□ -0.11
Cldn18P56857 Gm25406-201ENSMUST00000157599 105 ntBASIC14.34□□□□□ -0.11
Cldn18P56857 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn18P56857 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn18P56857 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn18P56857 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn18P56857 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn18P56857 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn18P56857 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC14.34□□□□□ -0.11
Cldn18P56857 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn18P56857 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC14.34□□□□□ -0.11
Cldn18P56857 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Cldn18P56857 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cldn18P56857 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Cldn18P56857 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms