Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NrlP54846 Gm8839-201ENSMUST00000121279 1645 ntBASIC17.07■□□□□ 0.32
NrlP54846 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
NrlP54846 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NrlP54846 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NrlP54846 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
NrlP54846 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
NrlP54846 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
NrlP54846 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NrlP54846 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NrlP54846 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NrlP54846 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC17.06■□□□□ 0.32
NrlP54846 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
NrlP54846 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC17.06■□□□□ 0.32
NrlP54846 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NrlP54846 AC154222.1-201ENSMUST00000223882 475 ntBASIC17.06■□□□□ 0.32
NrlP54846 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC17.06■□□□□ 0.32
NrlP54846 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NrlP54846 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
NrlP54846 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
NrlP54846 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
NrlP54846 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
NrlP54846 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NrlP54846 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NrlP54846 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
NrlP54846 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
NrlP54846 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NrlP54846 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NrlP54846 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NrlP54846 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
NrlP54846 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NrlP54846 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NrlP54846 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC17.05■□□□□ 0.32
NrlP54846 Gm13216-201ENSMUST00000117145 591 ntBASIC17.05■□□□□ 0.32
NrlP54846 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
NrlP54846 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC17.05■□□□□ 0.32
NrlP54846 Gm11780-201ENSMUST00000136880 516 ntBASIC17.05■□□□□ 0.32
NrlP54846 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC17.05■□□□□ 0.32
NrlP54846 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC17.05■□□□□ 0.32
NrlP54846 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
NrlP54846 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
NrlP54846 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NrlP54846 Gm8349-201ENSMUST00000182720 1003 ntBASIC17.05■□□□□ 0.32
NrlP54846 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
NrlP54846 Gm8655-201ENSMUST00000221159 852 ntBASIC17.05■□□□□ 0.32
NrlP54846 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC17.05■□□□□ 0.32
NrlP54846 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NrlP54846 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NrlP54846 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
NrlP54846 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
NrlP54846 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
NrlP54846 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NrlP54846 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
NrlP54846 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NrlP54846 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NrlP54846 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC17.05■□□□□ 0.32
NrlP54846 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC17.04■□□□□ 0.32
NrlP54846 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NrlP54846 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
NrlP54846 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
NrlP54846 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
NrlP54846 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
NrlP54846 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NrlP54846 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
NrlP54846 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC17.04■□□□□ 0.32
NrlP54846 Gm12260-201ENSMUST00000122447 411 ntBASIC17.04■□□□□ 0.32
NrlP54846 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
NrlP54846 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC17.04■□□□□ 0.32
NrlP54846 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NrlP54846 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC17.04■□□□□ 0.32
NrlP54846 Gm9172-201ENSMUST00000212092 954 ntBASIC17.04■□□□□ 0.32
NrlP54846 CT943659.1-201ENSMUST00000215459 326 ntBASIC17.04■□□□□ 0.32
NrlP54846 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NrlP54846 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NrlP54846 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NrlP54846 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
NrlP54846 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
NrlP54846 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
NrlP54846 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.04■□□□□ 0.32
NrlP54846 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
NrlP54846 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NrlP54846 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NrlP54846 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
NrlP54846 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NrlP54846 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NrlP54846 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NrlP54846 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NrlP54846 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
NrlP54846 Gm6736-201ENSMUST00000166583 948 ntBASIC17.03■□□□□ 0.32
NrlP54846 Gm27702-201ENSMUST00000184512 56 ntBASIC17.03■□□□□ 0.32
NrlP54846 Gm43935-201ENSMUST00000203569 1050 ntBASIC17.03■□□□□ 0.32
NrlP54846 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC17.03■□□□□ 0.32
NrlP54846 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC17.03■□□□□ 0.32
NrlP54846 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NrlP54846 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NrlP54846 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NrlP54846 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
NrlP54846 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
NrlP54846 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
NrlP54846 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms