Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Atxn1P54254 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Atxn1P54254 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Atxn1P54254 Gm45412-201ENSMUST00000210217 2275 ntBASIC15.91■□□□□ 0.14
Atxn1P54254 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Atxn1P54254 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Atxn1P54254 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Atxn1P54254 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Atxn1P54254 Gm16401-202ENSMUST00000197463 2074 ntBASIC15.9■□□□□ 0.14
Atxn1P54254 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Atxn1P54254 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Atxn1P54254 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Atxn1P54254 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Atxn1P54254 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Atxn1P54254 Gm4913-201ENSMUST00000117075 1290 ntBASIC15.9■□□□□ 0.14
Atxn1P54254 Gm14701-201ENSMUST00000117156 348 ntBASIC15.9■□□□□ 0.14
Atxn1P54254 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Atxn1P54254 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Atxn1P54254 Gm44872-201ENSMUST00000207864 420 ntBASIC15.9■□□□□ 0.14
Atxn1P54254 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Atxn1P54254 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Atxn1P54254 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Atxn1P54254 Gm20628-201ENSMUST00000177363 3215 ntBASIC15.9■□□□□ 0.14
Atxn1P54254 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Atxn1P54254 AC157650.3-201ENSMUST00000225058 1476 ntBASIC15.9■□□□□ 0.14
Atxn1P54254 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Atxn1P54254 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Atxn1P54254 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Atxn1P54254 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Atxn1P54254 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Atxn1P54254 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Atxn1P54254 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Atxn1P54254 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Atxn1P54254 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Atxn1P54254 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Atxn1P54254 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Atxn1P54254 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Atxn1P54254 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Atxn1P54254 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Atxn1P54254 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
Atxn1P54254 H2af-ps-201ENSMUST00000119066 295 ntBASIC15.89■□□□□ 0.13
Atxn1P54254 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC15.89■□□□□ 0.13
Atxn1P54254 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Atxn1P54254 Mir3113-201ENSMUST00000175478 76 ntBASIC15.89■□□□□ 0.13
Atxn1P54254 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Atxn1P54254 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC15.89■□□□□ 0.13
Atxn1P54254 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Atxn1P54254 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Atxn1P54254 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC15.89■□□□□ 0.13
Atxn1P54254 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Atxn1P54254 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Atxn1P54254 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC15.89■□□□□ 0.13
Atxn1P54254 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Atxn1P54254 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Atxn1P54254 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC15.89■□□□□ 0.13
Atxn1P54254 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Atxn1P54254 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Atxn1P54254 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Atxn1P54254 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Atxn1P54254 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Atxn1P54254 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Atxn1P54254 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Atxn1P54254 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Atxn1P54254 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Atxn1P54254 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Atxn1P54254 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Atxn1P54254 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Atxn1P54254 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Atxn1P54254 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Atxn1P54254 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Atxn1P54254 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC15.88■□□□□ 0.13
Atxn1P54254 Gm37584-201ENSMUST00000193595 1290 ntBASIC15.88■□□□□ 0.13
Atxn1P54254 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Atxn1P54254 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Atxn1P54254 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Atxn1P54254 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Atxn1P54254 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Atxn1P54254 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC15.88■□□□□ 0.13
Atxn1P54254 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Atxn1P54254 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Atxn1P54254 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Atxn1P54254 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Atxn1P54254 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Atxn1P54254 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Atxn1P54254 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Atxn1P54254 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Atxn1P54254 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Atxn1P54254 Gm11841-201ENSMUST00000117060 1963 ntBASIC15.87■□□□□ 0.13
Atxn1P54254 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Atxn1P54254 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Atxn1P54254 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Atxn1P54254 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC15.87■□□□□ 0.13
Atxn1P54254 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Atxn1P54254 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC15.87■□□□□ 0.13
Atxn1P54254 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Atxn1P54254 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC15.87■□□□□ 0.13
Atxn1P54254 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Atxn1P54254 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC15.87■□□□□ 0.13
Atxn1P54254 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Atxn1P54254 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms