Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Nkx2-6P43688 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nkx2-6P43688 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Nkx2-6P43688 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nkx2-6P43688 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Nkx2-6P43688 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nkx2-6P43688 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nkx2-6P43688 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Nkx2-6P43688 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Nkx2-6P43688 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nkx2-6P43688 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Nkx2-6P43688 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC15.14■□□□□ 0.01
Nkx2-6P43688 Gm13418-201ENSMUST00000119097 944 ntBASIC15.14■□□□□ 0.01
Nkx2-6P43688 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Nkx2-6P43688 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Nkx2-6P43688 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC15.14■□□□□ 0.01
Nkx2-6P43688 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC15.14■□□□□ 0.01
Nkx2-6P43688 AC154757.1-201ENSMUST00000228289 336 ntBASIC15.14■□□□□ 0.01
Nkx2-6P43688 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nkx2-6P43688 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Nkx2-6P43688 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nkx2-6P43688 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nkx2-6P43688 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nkx2-6P43688 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Nkx2-6P43688 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Nkx2-6P43688 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nkx2-6P43688 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Nkx2-6P43688 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nkx2-6P43688 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC15.14■□□□□ 0.01
Nkx2-6P43688 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nkx2-6P43688 CT010478.1-201ENSMUST00000220747 2787 ntBASIC15.13■□□□□ 0.01
Nkx2-6P43688 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Nkx2-6P43688 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nkx2-6P43688 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nkx2-6P43688 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nkx2-6P43688 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nkx2-6P43688 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Nkx2-6P43688 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nkx2-6P43688 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nkx2-6P43688 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nkx2-6P43688 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nkx2-6P43688 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Nkx2-6P43688 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nkx2-6P43688 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nkx2-6P43688 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC15.13■□□□□ 0.01
Nkx2-6P43688 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nkx2-6P43688 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC15.13■□□□□ 0.01
Nkx2-6P43688 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nkx2-6P43688 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC15.13■□□□□ 0.01
Nkx2-6P43688 Gm37935-201ENSMUST00000192012 982 ntBASIC15.13■□□□□ 0.01
Nkx2-6P43688 Gm37584-201ENSMUST00000193595 1290 ntBASIC15.13■□□□□ 0.01
Nkx2-6P43688 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nkx2-6P43688 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nkx2-6P43688 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nkx2-6P43688 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nkx2-6P43688 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Nkx2-6P43688 AC069562.2-201ENSMUST00000224644 2146 ntBASIC15.13■□□□□ 0.01
Nkx2-6P43688 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nkx2-6P43688 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nkx2-6P43688 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nkx2-6P43688 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nkx2-6P43688 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Nkx2-6P43688 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nkx2-6P43688 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nkx2-6P43688 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nkx2-6P43688 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nkx2-6P43688 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Nkx2-6P43688 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Nkx2-6P43688 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nkx2-6P43688 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nkx2-6P43688 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC15.12■□□□□ 0.01
Nkx2-6P43688 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC15.12■□□□□ 0.01
Nkx2-6P43688 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC15.12■□□□□ 0.01
Nkx2-6P43688 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Nkx2-6P43688 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Nkx2-6P43688 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Nkx2-6P43688 Mir6404-201ENSMUST00000183699 94 ntBASIC15.12■□□□□ 0.01
Nkx2-6P43688 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC15.12■□□□□ 0.01
Nkx2-6P43688 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
Nkx2-6P43688 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nkx2-6P43688 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC15.12■□□□□ 0.01
Nkx2-6P43688 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC15.12■□□□□ 0.01
Nkx2-6P43688 Gm8655-201ENSMUST00000221159 852 ntBASIC15.12■□□□□ 0.01
Nkx2-6P43688 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nkx2-6P43688 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nkx2-6P43688 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nkx2-6P43688 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nkx2-6P43688 Gm5867-201ENSMUST00000063197 592 ntBASIC15.12■□□□□ 0.01
Nkx2-6P43688 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nkx2-6P43688 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nkx2-6P43688 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC15.12■□□□□ 0.01
Nkx2-6P43688 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nkx2-6P43688 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nkx2-6P43688 AC154527.4-201ENSMUST00000224364 1667 ntBASIC15.12■□□□□ 0.01
Nkx2-6P43688 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
Nkx2-6P43688 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Nkx2-6P43688 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nkx2-6P43688 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nkx2-6P43688 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nkx2-6P43688 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms