Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Abca1P41233 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Abca1P41233 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Abca1P41233 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
Abca1P41233 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Abca1P41233 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Abca1P41233 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Abca1P41233 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Abca1P41233 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Abca1P41233 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Abca1P41233 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Abca1P41233 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Abca1P41233 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Abca1P41233 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Abca1P41233 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Abca1P41233 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Abca1P41233 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Abca1P41233 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Abca1P41233 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Abca1P41233 Gm7230-201ENSMUST00000173026 815 ntBASIC13.32□□□□□ -0.28
Abca1P41233 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC13.32□□□□□ -0.28
Abca1P41233 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC13.32□□□□□ -0.28
Abca1P41233 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC13.32□□□□□ -0.28
Abca1P41233 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Abca1P41233 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Abca1P41233 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Abca1P41233 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Abca1P41233 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Abca1P41233 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Abca1P41233 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Abca1P41233 Gm5898-201ENSMUST00000121016 2071 ntBASIC13.32□□□□□ -0.28
Abca1P41233 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Abca1P41233 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Abca1P41233 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC13.32□□□□□ -0.28
Abca1P41233 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC13.32□□□□□ -0.28
Abca1P41233 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC13.32□□□□□ -0.28
Abca1P41233 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Abca1P41233 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Abca1P41233 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Abca1P41233 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Abca1P41233 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC13.32□□□□□ -0.28
Abca1P41233 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Abca1P41233 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Abca1P41233 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Abca1P41233 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Abca1P41233 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Abca1P41233 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Abca1P41233 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Abca1P41233 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Abca1P41233 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Abca1P41233 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Abca1P41233 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Abca1P41233 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Abca1P41233 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Abca1P41233 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Abca1P41233 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Abca1P41233 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC13.31□□□□□ -0.28
Abca1P41233 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Abca1P41233 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Abca1P41233 Gm4995-201ENSMUST00000117247 432 ntBASIC13.31□□□□□ -0.28
Abca1P41233 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC13.31□□□□□ -0.28
Abca1P41233 Gm29707-201ENSMUST00000196325 491 ntBASIC13.31□□□□□ -0.28
Abca1P41233 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Abca1P41233 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Abca1P41233 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Abca1P41233 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Abca1P41233 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Abca1P41233 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Abca1P41233 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Abca1P41233 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Abca1P41233 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Abca1P41233 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Abca1P41233 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Abca1P41233 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Abca1P41233 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Abca1P41233 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Abca1P41233 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Abca1P41233 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC13.3□□□□□ -0.28
Abca1P41233 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Abca1P41233 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Abca1P41233 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC13.3□□□□□ -0.28
Abca1P41233 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC13.3□□□□□ -0.28
Abca1P41233 CT943659.1-201ENSMUST00000215459 326 ntBASIC13.3□□□□□ -0.28
Abca1P41233 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Abca1P41233 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Abca1P41233 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Abca1P41233 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Abca1P41233 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Abca1P41233 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Abca1P41233 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Abca1P41233 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC13.3□□□□□ -0.28
Abca1P41233 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Abca1P41233 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Abca1P41233 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Abca1P41233 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Abca1P41233 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Abca1P41233 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Abca1P41233 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC13.3□□□□□ -0.28
Abca1P41233 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC13.3□□□□□ -0.28
Abca1P41233 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms