Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC17.55■□□□□ 0.4
Sox5P35710 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sox5P35710 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sox5P35710 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC17.54■□□□□ 0.4
Sox5P35710 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sox5P35710 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Sox5P35710 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sox5P35710 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Sox5P35710 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
Sox5P35710 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sox5P35710 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sox5P35710 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sox5P35710 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sox5P35710 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sox5P35710 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sox5P35710 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sox5P35710 Mir1668-201ENSMUST00000184114 107 ntBASIC17.54■□□□□ 0.4
Sox5P35710 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Sox5P35710 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Sox5P35710 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sox5P35710 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Sox5P35710 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sox5P35710 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sox5P35710 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Sox5P35710 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Sox5P35710 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Sox5P35710 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sox5P35710 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sox5P35710 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Sox5P35710 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Sox5P35710 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Sox5P35710 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sox5P35710 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Sox5P35710 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sox5P35710 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sox5P35710 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sox5P35710 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sox5P35710 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Sox5P35710 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC17.53■□□□□ 0.4
Sox5P35710 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sox5P35710 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sox5P35710 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC17.53■□□□□ 0.4
Sox5P35710 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC17.53■□□□□ 0.4
Sox5P35710 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.53■□□□□ 0.4
Sox5P35710 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sox5P35710 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sox5P35710 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Sox5P35710 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC17.53■□□□□ 0.4
Sox5P35710 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
Sox5P35710 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Sox5P35710 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sox5P35710 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sox5P35710 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sox5P35710 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Sox5P35710 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sox5P35710 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sox5P35710 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Sox5P35710 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sox5P35710 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC17.53■□□□□ 0.4
Sox5P35710 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sox5P35710 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sox5P35710 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sox5P35710 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sox5P35710 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Sox5P35710 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sox5P35710 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Sox5P35710 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sox5P35710 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.52■□□□□ 0.4
Sox5P35710 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sox5P35710 Gm37055-201ENSMUST00000191866 133 ntBASIC17.52■□□□□ 0.4
Sox5P35710 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Sox5P35710 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sox5P35710 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sox5P35710 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Sox5P35710 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Sox5P35710 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Sox5P35710 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Sox5P35710 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Sox5P35710 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Sox5P35710 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Sox5P35710 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Sox5P35710 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Sox5P35710 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Sox5P35710 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
Sox5P35710 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sox5P35710 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sox5P35710 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sox5P35710 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Sox5P35710 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Sox5P35710 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sox5P35710 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sox5P35710 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sox5P35710 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Sox5P35710 Gm13559-201ENSMUST00000120476 863 ntBASIC17.51■□□□□ 0.39
Sox5P35710 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sox5P35710 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sox5P35710 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC17.51■□□□□ 0.39
Sox5P35710 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Sox5P35710 Gm20472-201ENSMUST00000174403 1240 ntBASIC17.51■□□□□ 0.39
Sox5P35710 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms