Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Thbs1P35441 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Thbs1P35441 AC153526.5-201ENSMUST00000218661 2147 ntBASIC14.84□□□□□ -0.03
Thbs1P35441 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Thbs1P35441 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Thbs1P35441 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Thbs1P35441 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Thbs1P35441 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Thbs1P35441 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
Thbs1P35441 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Thbs1P35441 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Thbs1P35441 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC14.84□□□□□ -0.03
Thbs1P35441 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Thbs1P35441 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC14.84□□□□□ -0.03
Thbs1P35441 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC14.84□□□□□ -0.03
Thbs1P35441 Gm6728-201ENSMUST00000178117 1065 ntBASIC14.84□□□□□ -0.03
Thbs1P35441 Gm5587-201ENSMUST00000206270 674 ntBASIC14.84□□□□□ -0.03
Thbs1P35441 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Thbs1P35441 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Thbs1P35441 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Thbs1P35441 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Thbs1P35441 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Thbs1P35441 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Thbs1P35441 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Thbs1P35441 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC14.84□□□□□ -0.03
Thbs1P35441 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC14.84□□□□□ -0.03
Thbs1P35441 AC093043.3-201ENSMUST00000226531 2273 ntBASIC14.83□□□□□ -0.03
Thbs1P35441 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Thbs1P35441 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Thbs1P35441 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Thbs1P35441 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Thbs1P35441 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Thbs1P35441 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC14.83□□□□□ -0.04
Thbs1P35441 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Thbs1P35441 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Thbs1P35441 AA414768-201ENSMUST00000121924 1257 ntBASIC14.83□□□□□ -0.04
Thbs1P35441 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC14.83□□□□□ -0.04
Thbs1P35441 CT009713.7-201ENSMUST00000224689 571 ntBASIC14.83□□□□□ -0.04
Thbs1P35441 AC125350.1-201ENSMUST00000225115 903 ntBASIC14.83□□□□□ -0.04
Thbs1P35441 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Thbs1P35441 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Thbs1P35441 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Thbs1P35441 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Thbs1P35441 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Thbs1P35441 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC14.83□□□□□ -0.04
Thbs1P35441 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Thbs1P35441 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC14.82□□□□□ -0.04
Thbs1P35441 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Thbs1P35441 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Thbs1P35441 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Thbs1P35441 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
Thbs1P35441 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Thbs1P35441 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Thbs1P35441 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Thbs1P35441 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Thbs1P35441 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Thbs1P35441 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Thbs1P35441 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Thbs1P35441 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Thbs1P35441 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Thbs1P35441 Gm7367-201ENSMUST00000057611 492 ntBASIC14.82□□□□□ -0.04
Thbs1P35441 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Thbs1P35441 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Thbs1P35441 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Thbs1P35441 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Thbs1P35441 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Thbs1P35441 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Thbs1P35441 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Thbs1P35441 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Thbs1P35441 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Thbs1P35441 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Thbs1P35441 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Thbs1P35441 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC14.81□□□□□ -0.04
Thbs1P35441 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Thbs1P35441 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Thbs1P35441 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Thbs1P35441 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Thbs1P35441 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Thbs1P35441 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Thbs1P35441 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Thbs1P35441 Gm6623-201ENSMUST00000173570 544 ntBASIC14.81□□□□□ -0.04
Thbs1P35441 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Thbs1P35441 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Thbs1P35441 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Thbs1P35441 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Thbs1P35441 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC14.81□□□□□ -0.04
Thbs1P35441 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Thbs1P35441 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Thbs1P35441 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Thbs1P35441 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Thbs1P35441 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Thbs1P35441 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Thbs1P35441 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
Thbs1P35441 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Thbs1P35441 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Thbs1P35441 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Thbs1P35441 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Thbs1P35441 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Thbs1P35441 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Thbs1P35441 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms