Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RxrbP28704 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RxrbP28704 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RxrbP28704 Gm37728-201ENSMUST00000195025 2292 ntBASIC16.15■□□□□ 0.18
RxrbP28704 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RxrbP28704 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RxrbP28704 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RxrbP28704 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RxrbP28704 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RxrbP28704 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RxrbP28704 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RxrbP28704 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RxrbP28704 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RxrbP28704 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
RxrbP28704 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RxrbP28704 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
RxrbP28704 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RxrbP28704 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RxrbP28704 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RxrbP28704 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RxrbP28704 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RxrbP28704 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC16.14■□□□□ 0.17
RxrbP28704 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
RxrbP28704 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RxrbP28704 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RxrbP28704 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
RxrbP28704 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
RxrbP28704 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RxrbP28704 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
RxrbP28704 Gm715-201ENSMUST00000117865 831 ntBASIC16.13■□□□□ 0.17
RxrbP28704 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC16.13■□□□□ 0.17
RxrbP28704 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC16.13■□□□□ 0.17
RxrbP28704 Gm21814-202ENSMUST00000203277 873 ntBASIC16.13■□□□□ 0.17
RxrbP28704 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
RxrbP28704 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
RxrbP28704 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
RxrbP28704 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
RxrbP28704 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
RxrbP28704 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RxrbP28704 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RxrbP28704 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RxrbP28704 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RxrbP28704 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
RxrbP28704 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC16.13■□□□□ 0.17
RxrbP28704 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
RxrbP28704 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RxrbP28704 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RxrbP28704 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RxrbP28704 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RxrbP28704 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RxrbP28704 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
RxrbP28704 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
RxrbP28704 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.12■□□□□ 0.17
RxrbP28704 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RxrbP28704 Gm13186-201ENSMUST00000118031 316 ntBASIC16.12■□□□□ 0.17
RxrbP28704 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC16.12■□□□□ 0.17
RxrbP28704 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC16.12■□□□□ 0.17
RxrbP28704 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RxrbP28704 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RxrbP28704 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC16.12■□□□□ 0.17
RxrbP28704 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RxrbP28704 Gm7791-201ENSMUST00000219066 539 ntBASIC16.12■□□□□ 0.17
RxrbP28704 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RxrbP28704 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
RxrbP28704 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
RxrbP28704 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
RxrbP28704 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RxrbP28704 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
RxrbP28704 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RxrbP28704 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RxrbP28704 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RxrbP28704 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RxrbP28704 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
RxrbP28704 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
RxrbP28704 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC16.11■□□□□ 0.17
RxrbP28704 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RxrbP28704 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RxrbP28704 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
RxrbP28704 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RxrbP28704 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RxrbP28704 Gm3375-201ENSMUST00000203929 796 ntBASIC16.11■□□□□ 0.17
RxrbP28704 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RxrbP28704 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RxrbP28704 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RxrbP28704 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
RxrbP28704 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RxrbP28704 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RxrbP28704 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RxrbP28704 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RxrbP28704 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RxrbP28704 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RxrbP28704 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RxrbP28704 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
RxrbP28704 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
RxrbP28704 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RxrbP28704 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RxrbP28704 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
RxrbP28704 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC16.1■□□□□ 0.17
RxrbP28704 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
RxrbP28704 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms