Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Pde6aP27664 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pde6aP27664 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pde6aP27664 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pde6aP27664 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pde6aP27664 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC18.6■□□□□ 0.57
Pde6aP27664 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pde6aP27664 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pde6aP27664 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pde6aP27664 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pde6aP27664 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
Pde6aP27664 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pde6aP27664 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pde6aP27664 Ntrk2-205ENSMUST00000224402 2284 ntBASIC18.6■□□□□ 0.57
Pde6aP27664 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pde6aP27664 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Pde6aP27664 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pde6aP27664 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC18.6■□□□□ 0.57
Pde6aP27664 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC18.6■□□□□ 0.57
Pde6aP27664 Gm25745-201ENSMUST00000174945 133 ntBASIC18.6■□□□□ 0.57
Pde6aP27664 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC18.6■□□□□ 0.57
Pde6aP27664 Gm17971-201ENSMUST00000190239 806 ntBASIC18.6■□□□□ 0.57
Pde6aP27664 Gm19430-201ENSMUST00000193847 2137 ntBASIC18.6■□□□□ 0.57
Pde6aP27664 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
Pde6aP27664 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pde6aP27664 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pde6aP27664 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pde6aP27664 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pde6aP27664 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pde6aP27664 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pde6aP27664 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Pde6aP27664 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pde6aP27664 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
Pde6aP27664 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pde6aP27664 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pde6aP27664 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Pde6aP27664 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pde6aP27664 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC18.59■□□□□ 0.57
Pde6aP27664 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pde6aP27664 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC18.59■□□□□ 0.57
Pde6aP27664 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Pde6aP27664 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC18.59■□□□□ 0.57
Pde6aP27664 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC18.59■□□□□ 0.57
Pde6aP27664 Gm34391-201ENSMUST00000203706 907 ntBASIC18.59■□□□□ 0.57
Pde6aP27664 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC18.59■□□□□ 0.57
Pde6aP27664 Cmtm5-203ENSMUST00000227441 610 ntBASIC18.59■□□□□ 0.57
Pde6aP27664 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC18.59■□□□□ 0.57
Pde6aP27664 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pde6aP27664 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pde6aP27664 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pde6aP27664 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pde6aP27664 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pde6aP27664 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pde6aP27664 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Pde6aP27664 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pde6aP27664 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pde6aP27664 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
Pde6aP27664 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pde6aP27664 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Pde6aP27664 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pde6aP27664 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Pde6aP27664 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Pde6aP27664 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pde6aP27664 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC18.58■□□□□ 0.57
Pde6aP27664 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
Pde6aP27664 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC18.58■□□□□ 0.57
Pde6aP27664 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC18.58■□□□□ 0.57
Pde6aP27664 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pde6aP27664 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC18.58■□□□□ 0.56
Pde6aP27664 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pde6aP27664 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pde6aP27664 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pde6aP27664 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pde6aP27664 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pde6aP27664 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pde6aP27664 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pde6aP27664 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pde6aP27664 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pde6aP27664 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pde6aP27664 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pde6aP27664 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC18.57■□□□□ 0.56
Pde6aP27664 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pde6aP27664 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC18.57■□□□□ 0.56
Pde6aP27664 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pde6aP27664 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC18.57■□□□□ 0.56
Pde6aP27664 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pde6aP27664 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Pde6aP27664 Gm12644-201ENSMUST00000119935 606 ntBASIC18.57■□□□□ 0.56
Pde6aP27664 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Pde6aP27664 Gm7506-201ENSMUST00000207758 815 ntBASIC18.57■□□□□ 0.56
Pde6aP27664 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pde6aP27664 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pde6aP27664 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pde6aP27664 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pde6aP27664 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pde6aP27664 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pde6aP27664 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
Pde6aP27664 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pde6aP27664 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pde6aP27664 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms