Protein–RNA interactions for Protein: P23611

Irf8, Interferon regulatory factor 8, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf8P23611 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC17.3■□□□□ 0.36
Irf8P23611 Gm28033-201ENSMUST00000184224 96 ntBASIC17.3■□□□□ 0.36
Irf8P23611 Gm10459-201ENSMUST00000202708 1155 ntBASIC17.3■□□□□ 0.36
Irf8P23611 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Irf8P23611 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC17.3■□□□□ 0.36
Irf8P23611 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC17.3■□□□□ 0.36
Irf8P23611 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Irf8P23611 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Irf8P23611 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Irf8P23611 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Irf8P23611 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
Irf8P23611 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Irf8P23611 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Irf8P23611 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Irf8P23611 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Irf8P23611 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC17.29■□□□□ 0.36
Irf8P23611 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Irf8P23611 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Irf8P23611 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
Irf8P23611 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Irf8P23611 AC069562.2-201ENSMUST00000224644 2146 ntBASIC17.29■□□□□ 0.36
Irf8P23611 Gm9103-201ENSMUST00000119371 405 ntBASIC17.29■□□□□ 0.36
Irf8P23611 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC17.29■□□□□ 0.36
Irf8P23611 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC17.29■□□□□ 0.36
Irf8P23611 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Irf8P23611 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Irf8P23611 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Irf8P23611 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Irf8P23611 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Irf8P23611 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Irf8P23611 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC17.29■□□□□ 0.36
Irf8P23611 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Irf8P23611 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Irf8P23611 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Irf8P23611 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Irf8P23611 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Irf8P23611 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Irf8P23611 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Irf8P23611 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Irf8P23611 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Irf8P23611 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Irf8P23611 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Irf8P23611 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Irf8P23611 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Irf8P23611 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Irf8P23611 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Irf8P23611 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Irf8P23611 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC17.28■□□□□ 0.36
Irf8P23611 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC17.28■□□□□ 0.36
Irf8P23611 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
Irf8P23611 Gm27867-201ENSMUST00000184778 125 ntBASIC17.28■□□□□ 0.36
Irf8P23611 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC17.28■□□□□ 0.36
Irf8P23611 Vti1a-206ENSMUST00000225529 1244 ntBASIC17.28■□□□□ 0.36
Irf8P23611 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Irf8P23611 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Irf8P23611 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Irf8P23611 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Irf8P23611 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC17.28■□□□□ 0.36
Irf8P23611 Gm26917-202ENSMUST00000192833 3329 ntBASIC17.28■□□□□ 0.36
Irf8P23611 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Irf8P23611 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Irf8P23611 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC17.28■□□□□ 0.36
Irf8P23611 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Irf8P23611 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Irf8P23611 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Irf8P23611 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Irf8P23611 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Irf8P23611 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Irf8P23611 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Irf8P23611 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Irf8P23611 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Irf8P23611 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC17.27■□□□□ 0.36
Irf8P23611 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Irf8P23611 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
Irf8P23611 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC17.27■□□□□ 0.36
Irf8P23611 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Irf8P23611 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC17.27■□□□□ 0.36
Irf8P23611 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Irf8P23611 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Irf8P23611 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Irf8P23611 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Irf8P23611 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Irf8P23611 Gm42473-201ENSMUST00000201056 2291 ntBASIC17.27■□□□□ 0.35
Irf8P23611 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Irf8P23611 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Irf8P23611 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Irf8P23611 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
Irf8P23611 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC17.26■□□□□ 0.35
Irf8P23611 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC17.26■□□□□ 0.35
Irf8P23611 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Irf8P23611 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Irf8P23611 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Irf8P23611 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Irf8P23611 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Irf8P23611 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Irf8P23611 Gm25745-201ENSMUST00000174945 133 ntBASIC17.26■□□□□ 0.35
Irf8P23611 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.26■□□□□ 0.35
Irf8P23611 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Irf8P23611 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
Irf8P23611 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms